BLASTX nr result

ID: Coptis21_contig00038332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038332
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320995.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29
ref|XP_002272941.1| PREDICTED: uncharacterized protein LOC100257...   130   8e-29
gb|ABR17786.1| unknown [Picea sitchensis]                             129   2e-28
dbj|BAF95873.1| hypothetical protein [Vitis hybrid cultivar]          128   4e-28
ref|XP_002307366.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28

>ref|XP_002320995.1| predicted protein [Populus trichocarpa] gi|222861768|gb|EEE99310.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  132 bits (331), Expect = 4e-29
 Identities = 61/83 (73%), Positives = 69/83 (83%)
 Frame = -1

Query: 275 VATILAGTATNPFNTGYFQGNALAPLEAVTACSGIFGKGAYPGYPGKLLMDRRSKASYNV 96
           +ATILAG ATNPF TGYFQG+ LAPLEAV+AC GIFG GAYPGYPG L++D+ SKASYNV
Sbjct: 241 IATILAGAATNPFKTGYFQGDILAPLEAVSACPGIFGAGAYPGYPGNLMVDKFSKASYNV 300

Query: 95  NGVKGHKFLLPAMWDLLTKTCTV 27
            G  G KFLLPA+WDL+  TC V
Sbjct: 301 YGANGEKFLLPAVWDLVGLTCKV 323


>ref|XP_002272941.1| PREDICTED: uncharacterized protein LOC100257315 [Vitis vinifera]
           gi|297743927|emb|CBI36897.3| unnamed protein product
           [Vitis vinifera]
          Length = 323

 Score =  130 bits (328), Expect = 8e-29
 Identities = 60/81 (74%), Positives = 67/81 (82%)
 Frame = -1

Query: 275 VATILAGTATNPFNTGYFQGNALAPLEAVTACSGIFGKGAYPGYPGKLLMDRRSKASYNV 96
           +ATILAG ATNPF TGYFQGNALAPLEAVTAC GIFG GAYPGYPG+L++D+ +KASYN 
Sbjct: 239 IATILAGAATNPFKTGYFQGNALAPLEAVTACPGIFGPGAYPGYPGELIVDKLTKASYNA 298

Query: 95  NGVKGHKFLLPAMWDLLTKTC 33
            G  G KFLLPA+WDL    C
Sbjct: 299 YGANGKKFLLPAIWDLKGLNC 319


>gb|ABR17786.1| unknown [Picea sitchensis]
          Length = 359

 Score =  129 bits (324), Expect = 2e-28
 Identities = 56/81 (69%), Positives = 71/81 (87%)
 Frame = -1

Query: 275 VATILAGTATNPFNTGYFQGNALAPLEAVTACSGIFGKGAYPGYPGKLLMDRRSKASYNV 96
           +AT+LAG ATNPFN+GYFQG+A APLEAV+AC GI+GKG+YPG+PG+LL+D+ + ASYN 
Sbjct: 275 IATVLAGAATNPFNSGYFQGDAAAPLEAVSACPGIYGKGSYPGFPGELLVDKTTGASYNA 334

Query: 95  NGVKGHKFLLPAMWDLLTKTC 33
           +GV G +FLLPAMWD  TK+C
Sbjct: 335 HGVNGRQFLLPAMWDPATKSC 355


>dbj|BAF95873.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 94

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/81 (72%), Positives = 66/81 (81%)
 Frame = -1

Query: 275 VATILAGTATNPFNTGYFQGNALAPLEAVTACSGIFGKGAYPGYPGKLLMDRRSKASYNV 96
           +ATILAG ATNPF TGYFQGNALAPLEAVTAC GI G GAYPGYPG+L++D+ +KASYN 
Sbjct: 10  IATILAGAATNPFKTGYFQGNALAPLEAVTACPGILGPGAYPGYPGELIVDKLTKASYNA 69

Query: 95  NGVKGHKFLLPAMWDLLTKTC 33
            G  G KFLLPA+WDL    C
Sbjct: 70  YGANGKKFLLPAIWDLKGLNC 90


>ref|XP_002307366.1| predicted protein [Populus trichocarpa] gi|222856815|gb|EEE94362.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  128 bits (321), Expect = 5e-28
 Identities = 57/81 (70%), Positives = 68/81 (83%)
 Frame = -1

Query: 275 VATILAGTATNPFNTGYFQGNALAPLEAVTACSGIFGKGAYPGYPGKLLMDRRSKASYNV 96
           +AT+LAGT TNPFN GYFQG A APLEAV+AC+GIFGKGAYPGYPG++L+D+ + ASYN 
Sbjct: 220 LATVLAGTVTNPFNNGYFQGPANAPLEAVSACTGIFGKGAYPGYPGEVLVDKTTGASYNA 279

Query: 95  NGVKGHKFLLPAMWDLLTKTC 33
            G+ G K+LLPAMWD  T TC
Sbjct: 280 FGINGRKYLLPAMWDPTTSTC 300


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