BLASTX nr result

ID: Coptis21_contig00038318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038318
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631273.1| PREDICTED: probable polygalacturonase At1g80...   213   1e-53
emb|CBI28554.3| unnamed protein product [Vitis vinifera]              213   1e-53
ref|XP_002317091.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-53
emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]   213   1e-53
ref|XP_002328587.1| predicted protein [Populus trichocarpa] gi|2...   213   2e-53

>ref|XP_003631273.1| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
           vinifera]
          Length = 462

 Score =  213 bits (542), Expect = 1e-53
 Identities = 98/118 (83%), Positives = 113/118 (95%)
 Frame = -3

Query: 356 IKMKNIYCGPGHGISIGSLGKDNSTGIVTKIVLDNAYFKETTNGLRIKTWQGGSGYVRAV 177
           IKMK IYCGPGHGISIGSLGKDNS+GIVTK+VLD+A+ + TTNGLRIKTWQGGSG+VRAV
Sbjct: 270 IKMKTIYCGPGHGISIGSLGKDNSSGIVTKVVLDSAFLRGTTNGLRIKTWQGGSGFVRAV 329

Query: 176 RFENVRVENIANPIIIDQFYCDSPKSCKNQTSAVEISQIVYRNISGTTKSARAMKFAC 3
           R++NVR+E++ANPI+IDQFYCDSP  CKNQTSAV+ISQI+YRNISGTTKSA+AMKFAC
Sbjct: 330 RYQNVRMEDVANPILIDQFYCDSPNECKNQTSAVQISQIMYRNISGTTKSAKAMKFAC 387


>emb|CBI28554.3| unnamed protein product [Vitis vinifera]
          Length = 1125

 Score =  213 bits (542), Expect = 1e-53
 Identities = 98/118 (83%), Positives = 113/118 (95%)
 Frame = -3

Query: 356  IKMKNIYCGPGHGISIGSLGKDNSTGIVTKIVLDNAYFKETTNGLRIKTWQGGSGYVRAV 177
            IKMK IYCGPGHGISIGSLGKDNS+GIVTK+VLD+A+ + TTNGLRIKTWQGGSG+VRAV
Sbjct: 919  IKMKTIYCGPGHGISIGSLGKDNSSGIVTKVVLDSAFLRGTTNGLRIKTWQGGSGFVRAV 978

Query: 176  RFENVRVENIANPIIIDQFYCDSPKSCKNQTSAVEISQIVYRNISGTTKSARAMKFAC 3
            R++NVR+E++ANPI+IDQFYCDSP  CKNQTSAV+ISQI+YRNISGTTKSA+AMKFAC
Sbjct: 979  RYQNVRMEDVANPILIDQFYCDSPNECKNQTSAVQISQIMYRNISGTTKSAKAMKFAC 1036


>ref|XP_002317091.1| predicted protein [Populus trichocarpa] gi|222860156|gb|EEE97703.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  213 bits (542), Expect = 1e-53
 Identities = 98/118 (83%), Positives = 111/118 (94%)
 Frame = -3

Query: 356 IKMKNIYCGPGHGISIGSLGKDNSTGIVTKIVLDNAYFKETTNGLRIKTWQGGSGYVRAV 177
           IKMK IYCGPGHG+SIGSLGKDNSTGIVTK+VLD A  +ETTNG+RIKTWQGG+GYVR V
Sbjct: 241 IKMKGIYCGPGHGVSIGSLGKDNSTGIVTKVVLDTALIRETTNGVRIKTWQGGNGYVRGV 300

Query: 176 RFENVRVENIANPIIIDQFYCDSPKSCKNQTSAVEISQIVYRNISGTTKSARAMKFAC 3
           RFENVR++N+ NPIIIDQFYCDSPKSC+NQTSAV IS+I+YRNISGTTKSA+AMKF+C
Sbjct: 301 RFENVRMDNVDNPIIIDQFYCDSPKSCQNQTSAVRISEIMYRNISGTTKSAKAMKFSC 358


>emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]
          Length = 1052

 Score =  213 bits (542), Expect = 1e-53
 Identities = 98/118 (83%), Positives = 113/118 (95%)
 Frame = -3

Query: 356  IKMKNIYCGPGHGISIGSLGKDNSTGIVTKIVLDNAYFKETTNGLRIKTWQGGSGYVRAV 177
            IKMK IYCGPGHGISIGSLGKDNS+GIVTK+VLD+A+ + TTNGLRIKTWQGGSG+VRAV
Sbjct: 860  IKMKTIYCGPGHGISIGSLGKDNSSGIVTKVVLDSAFLRGTTNGLRIKTWQGGSGFVRAV 919

Query: 176  RFENVRVENIANPIIIDQFYCDSPKSCKNQTSAVEISQIVYRNISGTTKSARAMKFAC 3
            R++NVR+E++ANPI+IDQFYCDSP  CKNQTSAV+ISQI+YRNISGTTKSA+AMKFAC
Sbjct: 920  RYQNVRMEDVANPILIDQFYCDSPNECKNQTSAVQISQIMYRNISGTTKSAKAMKFAC 977


>ref|XP_002328587.1| predicted protein [Populus trichocarpa] gi|222838569|gb|EEE76934.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  213 bits (541), Expect = 2e-53
 Identities = 98/118 (83%), Positives = 110/118 (93%)
 Frame = -3

Query: 356 IKMKNIYCGPGHGISIGSLGKDNSTGIVTKIVLDNAYFKETTNGLRIKTWQGGSGYVRAV 177
           IKMK I+CGPGHGISIGSLGKDNSTG+VTK+VLD A+ +ETTNGLRIKTWQGG GYVR V
Sbjct: 271 IKMKRIFCGPGHGISIGSLGKDNSTGMVTKVVLDTAFLRETTNGLRIKTWQGGHGYVRGV 330

Query: 176 RFENVRVENIANPIIIDQFYCDSPKSCKNQTSAVEISQIVYRNISGTTKSARAMKFAC 3
           RFENV +EN+ANP+IIDQFYCDSPK+C NQTSAVEIS+I YRNISGTTKS++AMKFAC
Sbjct: 331 RFENVGMENVANPVIIDQFYCDSPKTCHNQTSAVEISEITYRNISGTTKSSKAMKFAC 388


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