BLASTX nr result

ID: Coptis21_contig00038301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038301
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331672.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_002270551.1| PREDICTED: uncharacterized protein LOC100259...   112   3e-23
ref|XP_004163726.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional...   104   8e-21
ref|XP_004146302.1| PREDICTED: bifunctional dethiobiotin synthet...   104   8e-21
ref|XP_002526233.1| adenosylmethionine-8-amino-7-oxononanoate am...   100   9e-20

>ref|XP_002331672.1| predicted protein [Populus trichocarpa] gi|222874091|gb|EEF11222.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/119 (48%), Positives = 83/119 (69%)
 Frame = +3

Query: 3   YIKPIQTGFPSDSDSRFVYRNISDIVTHRNIPINLFASNHALKSSVFAAREVSGSDIEEE 182
           Y+KPIQTGFPSDSDS FV+  +S + + R+ P++L ASN  L SS+ AA  + G D + +
Sbjct: 76  YLKPIQTGFPSDSDSHFVFSKLSSLASLRSSPLSLSASNSVLNSSLSAASSLFGDDSKTK 135

Query: 183 CGNEGMRDLCWYEEMRIGEEGVVRNNKLVCKMLYGWKEAISPHLAVERENAGLEDEVLL 359
             N G+ +L + EE R  ++GV   ++LVC+ LY WKEA+SPHLA E+EN  +ED ++L
Sbjct: 136 GRNLGIYNLNFTEENRFVKDGVNVVSELVCETLYAWKEAVSPHLAAEKENGVVEDSLVL 194


>ref|XP_002270551.1| PREDICTED: uncharacterized protein LOC100259784 [Vitis vinifera]
           gi|297735352|emb|CBI17792.3| unnamed protein product
           [Vitis vinifera]
          Length = 863

 Score =  112 bits (280), Expect = 3e-23
 Identities = 64/121 (52%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
 Frame = +3

Query: 3   YIKPIQTGFPSDSDSRFVYRNISDIVTHRNIPINLFASNHALKSSVFAAREVSGSDIEEE 182
           YIKP+QTGFPSDSDS FV+R  S +V  R     + ASNH LK+S  AA  V G   E  
Sbjct: 92  YIKPVQTGFPSDSDSAFVFRKFSQLVLRRRPSFAVSASNHVLKASASAAEAVLGFGSE-- 149

Query: 183 CGNEGMRDLCWYEEMR-IGEEGVV-RNNKLVCKMLYGWKEAISPHLAVERENAGLEDEVL 356
            G   +RDL  YEE R +GEE      ++L CK +Y W+EAISPHLAVERE   + D+VL
Sbjct: 150 -GEGELRDLGAYEERRLLGEEWAAGAASELTCKTMYAWREAISPHLAVEREGGAVPDKVL 208

Query: 357 L 359
           L
Sbjct: 209 L 209


>ref|XP_004163726.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional dethiobiotin
           synthetase/7,8-diamino-pelargonic acid aminotransferase,
           mitochondrial-like [Cucumis sativus]
          Length = 844

 Score =  104 bits (259), Expect = 8e-21
 Identities = 52/121 (42%), Positives = 77/121 (63%)
 Frame = +3

Query: 3   YIKPIQTGFPSDSDSRFVYRNISDIVTHRNIPINLFASNHALKSSVFAAREVSGSDIEEE 182
           Y+KPIQTGFPSDSDSRFV+  +S +   R+  ++L AS+H L +S+     ++G     E
Sbjct: 71  YLKPIQTGFPSDSDSRFVFHKLSSLYRRRHARLSLLASDHVLNASLPVLNSITGCGDGSE 130

Query: 183 CGNEGMRDLCWYEEMRIGEEGVVRNNKLVCKMLYGWKEAISPHLAVERENAGLEDEVLLG 362
                M +L  YEE R+  E     ++L+CK +Y WKEA+SPHLA ERE+  ++D +++ 
Sbjct: 131 L---AMCELGQYEEQRLVGEESGLGSRLICKTMYAWKEAVSPHLAAERESGVVDDALVIQ 187

Query: 363 S 365
           S
Sbjct: 188 S 188


>ref|XP_004146302.1| PREDICTED: bifunctional dethiobiotin
           synthetase/7,8-diamino-pelargonic acid aminotransferase,
           mitochondrial-like [Cucumis sativus]
          Length = 852

 Score =  104 bits (259), Expect = 8e-21
 Identities = 52/121 (42%), Positives = 77/121 (63%)
 Frame = +3

Query: 3   YIKPIQTGFPSDSDSRFVYRNISDIVTHRNIPINLFASNHALKSSVFAAREVSGSDIEEE 182
           Y+KPIQTGFPSDSDSRFV+  +S +   R+  ++L AS+H L +S+     ++G     E
Sbjct: 71  YLKPIQTGFPSDSDSRFVFHKLSSLYRRRHARLSLLASDHVLNASLPVLNSITGCGDGSE 130

Query: 183 CGNEGMRDLCWYEEMRIGEEGVVRNNKLVCKMLYGWKEAISPHLAVERENAGLEDEVLLG 362
                M +L  YEE R+  E     ++L+CK +Y WKEA+SPHLA ERE+  ++D +++ 
Sbjct: 131 L---AMCELGQYEEQRLVGEESGLGSRLICKTMYAWKEAVSPHLAAERESGVVDDALVIQ 187

Query: 363 S 365
           S
Sbjct: 188 S 188


>ref|XP_002526233.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase,
           putative [Ricinus communis] gi|223534472|gb|EEF36174.1|
           adenosylmethionine-8-amino-7-oxononanoate
           aminotransferase, putative [Ricinus communis]
          Length = 400

 Score =  100 bits (250), Expect = 9e-20
 Identities = 56/129 (43%), Positives = 81/129 (62%), Gaps = 8/129 (6%)
 Frame = +3

Query: 3   YIKPIQTGFPSDSDSRFVYRNISDIVTHR-NIPINLFASNHALKSSVFAAREVSGSDIEE 179
           Y+KP+QTGFPSDSDS F++  +  + + R ++P +LF+SN  LKSS+ AA+     D + 
Sbjct: 79  YLKPVQTGFPSDSDSHFLFTKLHSLASRRTSLPFSLFSSNSVLKSSLPAAKSHLSLDFD- 137

Query: 180 ECGNE-----GMRDLCWYEEMRI--GEEGVVRNNKLVCKMLYGWKEAISPHLAVERENAG 338
              NE     GM DL + EE +    + G   N++L+CK L+ W +A+SPHLA EREN  
Sbjct: 138 --ANEFKFKFGMYDLNFREENKALSNDGGGADNSELICKTLFAWNDAVSPHLAAERENGV 195

Query: 339 LEDEVLLGS 365
           +ED  +L S
Sbjct: 196 VEDAAVLES 204


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