BLASTX nr result

ID: Coptis21_contig00038295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038295
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37746.3| unnamed protein product [Vitis vinifera]              161   6e-38
ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containi...   161   6e-38
emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]   157   1e-36
ref|XP_002886104.1| pentatricopeptide repeat-containing protein ...   152   4e-35
ref|XP_002520932.1| pentatricopeptide repeat-containing protein,...   151   6e-35

>emb|CBI37746.3| unnamed protein product [Vitis vinifera]
          Length = 2090

 Score =  161 bits (407), Expect = 6e-38
 Identities = 82/143 (57%), Positives = 100/143 (69%)
 Frame = +1

Query: 16  SVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEMLSG 195
           SVQNSLL  Y++   +E   +LFDEM  RDV+SWSVMI  YVQ+GE         EM S 
Sbjct: 172 SVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSN 230

Query: 196 NGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDADS 375
             +E D +T+VS+LKACA   D+  GR+VH  VICRG   D FVGNS++DMYSKC D +S
Sbjct: 231 ASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHES 290

Query: 376 AFKIFNEMPQKNIVSWNSVLSGL 444
           AFK FNEMP +N VSWNS++SGL
Sbjct: 291 AFKAFNEMPCRNTVSWNSIISGL 313



 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 48/143 (33%), Positives = 82/143 (57%)
 Frame = +1

Query: 10  NISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEML 189
           N  V NSL+  YS+   +E   KLFD +  +D VSWS MI  +   G+        +EM 
Sbjct: 372 NEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMN 431

Query: 190 SGNGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDA 369
                +P+ +T++S+L+A +   D+   +  H   I RG  ++  VG +++DMY+KC + 
Sbjct: 432 QAQE-KPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEI 490

Query: 370 DSAFKIFNEMPQKNIVSWNSVLS 438
             + K F+++P+KNIVSW ++++
Sbjct: 491 GLSRKAFDQIPEKNIVSWGAMIA 513



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/144 (33%), Positives = 82/144 (56%)
 Frame = +1

Query: 10  NISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEML 189
           ++ V NS++  YS+    E   K F+EMP R+ VSW+ +I   V++ +          M 
Sbjct: 271 DLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMG 330

Query: 190 SGNGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDA 369
              G   DE+T+V++L++C    D    + +H  VI  G+  + FV NSL+D YSKC   
Sbjct: 331 KA-GFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLI 389

Query: 370 DSAFKIFNEMPQKNIVSWNSVLSG 441
           + A+K+F+ +  K+ VSW+++++G
Sbjct: 390 ELAWKLFDRLKTKDTVSWSAMIAG 413



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 45/142 (31%), Positives = 77/142 (54%)
 Frame = +1

Query: 16  SVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEMLSG 195
           S  NS+L FY + G L+    +FD M  RD VSW++MI  ++  G         ++    
Sbjct: 71  STGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQ-ARV 129

Query: 196 NGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDADS 375
              EP+  T+V  + AC  +  ++ G  +H Y+I  GF     V NSL+ MY+   D + 
Sbjct: 130 IAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMER 188

Query: 376 AFKIFNEMPQKNIVSWNSVLSG 441
           A ++F+EM +++++SW+ ++ G
Sbjct: 189 AEELFDEMCERDVISWSVMIGG 210



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
 Frame = +1

Query: 1   LLANISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXK 180
           L A ++V  ++L  Y++ G +   RK FD++P +++VSW  MI A   +G          
Sbjct: 470 LAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLS 529

Query: 181 EMLSGNGVEPDELTVVSILKACAGITDVDSGRAVHRYVI-CRGFRSDTFVGNSLVDMYSK 357
           EM   +G++P+ +T +S+L AC+    V+ G +    ++   G        + +VDM S+
Sbjct: 530 EM-KLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSR 588

Query: 358 CIDADSAFKIFNEMPQK---NIVSWNSVLS 438
               +SA  +  +MP++       W ++LS
Sbjct: 589 AGKLNSAMNLIEKMPERMRDGAGLWGALLS 618


>ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Vitis vinifera]
          Length = 742

 Score =  161 bits (407), Expect = 6e-38
 Identities = 82/143 (57%), Positives = 100/143 (69%)
 Frame = +1

Query: 16  SVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEMLSG 195
           SVQNSLL  Y++   +E   +LFDEM  RDV+SWSVMI  YVQ+GE         EM S 
Sbjct: 186 SVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSN 244

Query: 196 NGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDADS 375
             +E D +T+VS+LKACA   D+  GR+VH  VICRG   D FVGNS++DMYSKC D +S
Sbjct: 245 ASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHES 304

Query: 376 AFKIFNEMPQKNIVSWNSVLSGL 444
           AFK FNEMP +N VSWNS++SGL
Sbjct: 305 AFKAFNEMPCRNTVSWNSIISGL 327



 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 48/143 (33%), Positives = 82/143 (57%)
 Frame = +1

Query: 10  NISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEML 189
           N  V NSL+  YS+   +E   KLFD +  +D VSWS MI  +   G+        +EM 
Sbjct: 386 NEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMN 445

Query: 190 SGNGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDA 369
                +P+ +T++S+L+A +   D+   +  H   I RG  ++  VG +++DMY+KC + 
Sbjct: 446 QAQE-KPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEI 504

Query: 370 DSAFKIFNEMPQKNIVSWNSVLS 438
             + K F+++P+KNIVSW ++++
Sbjct: 505 GLSRKAFDQIPEKNIVSWGAMIA 527



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/144 (33%), Positives = 82/144 (56%)
 Frame = +1

Query: 10  NISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEML 189
           ++ V NS++  YS+    E   K F+EMP R+ VSW+ +I   V++ +          M 
Sbjct: 285 DLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMG 344

Query: 190 SGNGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDA 369
              G   DE+T+V++L++C    D    + +H  VI  G+  + FV NSL+D YSKC   
Sbjct: 345 KA-GFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLI 403

Query: 370 DSAFKIFNEMPQKNIVSWNSVLSG 441
           + A+K+F+ +  K+ VSW+++++G
Sbjct: 404 ELAWKLFDRLKTKDTVSWSAMIAG 427



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 45/142 (31%), Positives = 77/142 (54%)
 Frame = +1

Query: 16  SVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEMLSG 195
           S  NS+L FY + G L+    +FD M  RD VSW++MI  ++  G         ++    
Sbjct: 85  STGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQ-ARV 143

Query: 196 NGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDADS 375
              EP+  T+V  + AC  +  ++ G  +H Y+I  GF     V NSL+ MY+   D + 
Sbjct: 144 IAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMER 202

Query: 376 AFKIFNEMPQKNIVSWNSVLSG 441
           A ++F+EM +++++SW+ ++ G
Sbjct: 203 AEELFDEMCERDVISWSVMIGG 224



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
 Frame = +1

Query: 1   LLANISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXK 180
           L A ++V  ++L  Y++ G +   RK FD++P +++VSW  MI A   +G          
Sbjct: 484 LAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLS 543

Query: 181 EMLSGNGVEPDELTVVSILKACAGITDVDSGRAVHRYVI-CRGFRSDTFVGNSLVDMYSK 357
           EM   +G++P+ +T +S+L AC+    V+ G +    ++   G        + +VDM S+
Sbjct: 544 EM-KLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSR 602

Query: 358 CIDADSAFKIFNEMPQK---NIVSWNSVLS 438
               +SA  +  +MP++       W ++LS
Sbjct: 603 AGKLNSAMNLIEKMPERMRDGAGLWGALLS 632



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/77 (40%), Positives = 47/77 (61%)
 Frame = +1

Query: 211 DELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDADSAFKIF 390
           D   V SILKAC+ +  V  G+++H  ++ +GF S T  GNS++D Y K    DSA  +F
Sbjct: 49  DPTLVHSILKACSSLP-VRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVF 107

Query: 391 NEMPQKNIVSWNSVLSG 441
           + M  ++ VSWN ++ G
Sbjct: 108 DSMRSRDSVSWNIMIHG 124


>emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
          Length = 1007

 Score =  157 bits (396), Expect = 1e-36
 Identities = 82/143 (57%), Positives = 100/143 (69%)
 Frame = +1

Query: 16  SVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEMLSG 195
           SVQNSLL  Y++   +E   +LFDEM  RDV+SWSVMI  YVQ+GE         EM S 
Sbjct: 186 SVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAXMALQLFLEMXSN 244

Query: 196 NGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDADS 375
             +E D +T+VS+LKACA   D+  GR+VH  VICRG   D FVGNS++DMYSK  D +S
Sbjct: 245 AXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHES 304

Query: 376 AFKIFNEMPQKNIVSWNSVLSGL 444
           AFK FNEMP +N VSWNS++SGL
Sbjct: 305 AFKAFNEMPCRNTVSWNSIISGL 327



 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/143 (33%), Positives = 82/143 (57%)
 Frame = +1

Query: 10  NISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEML 189
           N  V NSL+  YS+   +E   KLFD +  +D VSWS MI  +   G+        +EM 
Sbjct: 386 NEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMN 445

Query: 190 SGNGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDA 369
                +P+ +T++S+L+A +   D+   +  H   I RG  ++  VG +++DMY+KC + 
Sbjct: 446 QAQE-KPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEI 504

Query: 370 DSAFKIFNEMPQKNIVSWNSVLS 438
             + K F+++P+KNIVSW ++++
Sbjct: 505 GLSRKAFDQIPEKNIVSWGAMIA 527



 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 48/144 (33%), Positives = 82/144 (56%)
 Frame = +1

Query: 10  NISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEML 189
           ++ V NS++  YS+    E   K F+EMP R+ VSW+ +I   V++ +          M 
Sbjct: 285 DLFVGNSIIDMYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMG 344

Query: 190 SGNGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDA 369
              G   DE+T+V++L++C    D    + +H  VI  G+  + FV NSL+D YSKC   
Sbjct: 345 KA-GFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLI 403

Query: 370 DSAFKIFNEMPQKNIVSWNSVLSG 441
           + A+K+F+ +  K+ VSW+++++G
Sbjct: 404 ELAWKLFDRLKTKDTVSWSAMIAG 427



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/142 (31%), Positives = 76/142 (53%)
 Frame = +1

Query: 16  SVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEMLSG 195
           S  NS   FY + G L+    +FD M  RD VSW++MI  ++  G         ++    
Sbjct: 85  STGNSXXDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDXGLWWFRQ-ARV 143

Query: 196 NGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDADS 375
              EP+  T+V  + AC  +  ++ G  +H Y+I  GF     V NSL+ MY+   D + 
Sbjct: 144 IAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMER 202

Query: 376 AFKIFNEMPQKNIVSWNSVLSG 441
           A ++F+EM +++++SW+ ++ G
Sbjct: 203 AEELFDEMCERDVISWSVMIGG 224



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
 Frame = +1

Query: 1   LLANISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXK 180
           L A ++V  ++L  Y++ G +   RK FD++P +++VSW  MI A   +G          
Sbjct: 484 LAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLS 543

Query: 181 EMLSGNGVEPDELTVVSILKACAGITDVDSGRAVHRYVI-CRGFRSDTFVGNSLVDMYSK 357
           EM   +G++P+ +T +S+L AC+    V+ G +    ++   G        + +VDM  +
Sbjct: 544 EM-KLHGLKPNXVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLXR 602

Query: 358 CIDADSAFKIFNEMPQK---NIVSWNSVLS 438
               + A  +  +MP++       W ++LS
Sbjct: 603 AGKLNXAMNLIEKMPERMRDGAGLWGALLS 632



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/77 (40%), Positives = 45/77 (58%)
 Frame = +1

Query: 211 DELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDADSAFKIF 390
           D   V SILKAC+ +  V  G+++H  ++ +GF S T  GNS  D Y K    DSA  +F
Sbjct: 49  DPTLVHSILKACSSLP-VRHGKSIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVF 107

Query: 391 NEMPQKNIVSWNSVLSG 441
           + M  ++ VSWN ++ G
Sbjct: 108 DSMRSRDSVSWNIMIHG 124


>ref|XP_002886104.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331944|gb|EFH62363.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 723

 Score =  152 bits (383), Expect = 4e-35
 Identities = 83/143 (58%), Positives = 101/143 (70%), Gaps = 1/143 (0%)
 Frame = +1

Query: 16  SVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEMLSG 195
           SVQNS+L  YSEF  L   RKLFDEM  RDV+SWSV+I +YVQS E        KEM+  
Sbjct: 169 SVQNSILCLYSEFDSLS-ARKLFDEMSERDVISWSVVIRSYVQSQEPVLGLELFKEMVRE 227

Query: 196 NGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGF-RSDTFVGNSLVDMYSKCIDAD 372
              EPD +TV S+LKACA + D+D GR+VH + I RGF   D FV NSL+DMYSK  DAD
Sbjct: 228 AKTEPDCVTVTSVLKACAVLDDIDVGRSVHGFSIRRGFDLVDVFVRNSLIDMYSKGYDAD 287

Query: 373 SAFKIFNEMPQKNIVSWNSVLSG 441
           SAF++F+E   +NIVSWNS+L+G
Sbjct: 288 SAFRVFDETTCRNIVSWNSILAG 310



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/147 (29%), Positives = 83/147 (56%)
 Frame = +1

Query: 4   LANISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKE 183
           L ++ V+NSL+  YS+    +   ++FDE   R++VSW+ ++  +V +          + 
Sbjct: 267 LVDVFVRNSLIDMYSKGYDADSAFRVFDETTCRNIVSWNSILAGFVYNQRYDEALEMFR- 325

Query: 184 MLSGNGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCI 363
           ++    +E DE+T+VS+L+ C         +++H  +I RG+ S+    +SL+D Y+ C 
Sbjct: 326 LMKKEALEADEVTLVSLLQVCKFFEHPLPCKSIHGVIIRRGYESNEVALSSLMDAYTSCS 385

Query: 364 DADSAFKIFNEMPQKNIVSWNSVLSGL 444
             D A  +F+ M  K++VS ++++SGL
Sbjct: 386 LVDDARTVFDSMSYKDVVSCSTMISGL 412



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 48/141 (34%), Positives = 78/141 (55%)
 Frame = +1

Query: 13  ISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEMLS 192
           +SV NS+  FY + G L    + FD M  RD VSW+V++   +  G          + L 
Sbjct: 69  VSVGNSIADFYMKCGDLCSGLRAFDCMNSRDSVSWNVIVFGLLDHGFEEEGLWWFSK-LR 127

Query: 193 GNGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDAD 372
             G EP+  T+V ++ AC  +     G  +H YVI  GF   + V NS++ +YS+  D+ 
Sbjct: 128 VWGFEPNVSTLVLVIHACRSLW--FDGEKIHGYVIRSGFWRISSVQNSILCLYSE-FDSL 184

Query: 373 SAFKIFNEMPQKNIVSWNSVL 435
           SA K+F+EM +++++SW+ V+
Sbjct: 185 SARKLFDEMSERDVISWSVVI 205



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
 Frame = +1

Query: 25  NSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEMLSGNGV 204
           +SL+  Y+    ++  R +FD M  +DVVS S MI    + G          +M      
Sbjct: 375 SSLMDAYTSCSLVDDARTVFDSMSYKDVVSCSTMISGLGRCGRSDEAISIFCQMRD---- 430

Query: 205 EPDELTVVSILKACAGITDVDSGRAVHRYVICRGFR-SDTFVGNSLVDMYSKCIDADSAF 381
           +P+ +TV+S+L AC+    + + +  H   I RG   +D  V  S+VD Y+KC   D A 
Sbjct: 431 KPNAITVISLLSACSVSAVLRTSKWAHGIAIRRGLAINDISVDTSIVDAYAKCGAIDIAR 490

Query: 382 KIFNEMPQKNIVSWNSVLS 438
           + F+++ +K+IVSW  ++S
Sbjct: 491 RTFDQITEKSIVSWTVIIS 509



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/147 (25%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
 Frame = +1

Query: 10  NISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEML 189
           +ISV  S++  Y++ G ++  R+ FD++  + +VSW+V+I AY  +G          EM 
Sbjct: 469 DISVDTSIVDAYAKCGAIDIARRTFDQITEKSIVSWTVIISAYAINGLPDKALASFDEM- 527

Query: 190 SGNGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDA 369
             +   P+ +T ++ L AC     V  G  + R ++    +      + +VDM S+  + 
Sbjct: 528 KRDSYTPNAVTYLAALSACNHGGLVKKGLMIFRSMVEEDQKPSLQHYSCIVDMLSRAGEI 587

Query: 370 DSAFKIFNEMPQ---KNIVSWNSVLSG 441
           D+A ++   +P+       +W ++LSG
Sbjct: 588 DTAMELIKNLPEDVKAGASAWGAILSG 614


>ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539898|gb|EEF41477.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 757

 Score =  151 bits (381), Expect = 6e-35
 Identities = 79/148 (53%), Positives = 102/148 (68%)
 Frame = +1

Query: 1   LLANISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXK 180
           L A+ SVQNS L  Y++   ++  R LFDEMP +DV+SWS MI  YVQ  E        +
Sbjct: 196 LWASWSVQNSFLCMYADVD-MDCARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQ 254

Query: 181 EMLSGNGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKC 360
           +MLS + + PD + +VS+LKACA   ++  GR VH   ICRG  SD FV NSL+DMYSKC
Sbjct: 255 KMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKC 314

Query: 361 IDADSAFKIFNEMPQKNIVSWNSVLSGL 444
            DA SAF++F+EMP++N VSWNS+LSGL
Sbjct: 315 KDAGSAFEVFSEMPRRNNVSWNSLLSGL 342



 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 47/144 (32%), Positives = 85/144 (59%)
 Frame = +1

Query: 7   ANISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEM 186
           +N  V NSL+  Y++   +E   ++F     RDVV WS MI  +   G+        ++M
Sbjct: 400 SNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKM 459

Query: 187 LSGNGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCID 366
             G  V P+ +T++++L+AC+   ++      H   I RG  ++  VG ++VDMYSKC +
Sbjct: 460 NEGIEV-PNAVTIINLLQACSVSAELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGE 518

Query: 367 ADSAFKIFNEMPQKNIVSWNSVLS 438
            +++ K FN++PQKNI++W+++++
Sbjct: 519 IEASRKAFNQIPQKNIITWSTMIA 542



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/142 (33%), Positives = 77/142 (54%)
 Frame = +1

Query: 16  SVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEMLSG 195
           S+ NS+L FY + G L+    +FD M  RD VSW+V+I   +  G               
Sbjct: 100 SIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVA 159

Query: 196 NGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDADS 375
            G EP+  T+V +++AC  +     G  +H Y+I  G  +   V NS + MY+  +D D 
Sbjct: 160 -GFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASWSVQNSFLCMYAD-VDMDC 217

Query: 376 AFKIFNEMPQKNIVSWNSVLSG 441
           A  +F+EMP+K+++SW++++ G
Sbjct: 218 ARILFDEMPEKDVISWSAMIGG 239



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/145 (29%), Positives = 82/145 (56%)
 Frame = +1

Query: 7   ANISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXKEM 186
           +++ V+NSL+  YS+        ++F EMP R+ VSW+ ++   + + +          M
Sbjct: 299 SDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSM 358

Query: 187 LSGNGVEPDELTVVSILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCID 366
            +  G+E DE+T+V+ L+ C         +AVH   I RG  S+  V NSL+D Y+KC  
Sbjct: 359 RT-EGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNL 417

Query: 367 ADSAFKIFNEMPQKNIVSWNSVLSG 441
            + A+++F+   ++++V W+++++G
Sbjct: 418 IELAWEVFSRTRRRDVVLWSTMIAG 442



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 43/150 (28%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
 Frame = +1

Query: 1   LLANISVQNSLLGFYSEFGGLEFPRKLFDEMPVRDVVSWSVMIVAYVQSGEXXXXXXXXK 180
           L A ++V  +++  YS+ G +E  RK F+++P +++++WS MI AY  +G          
Sbjct: 499 LAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALALLA 558

Query: 181 EMLSGNGVEPDELTVVSILKACAGITDVDSGRAVHRYVI-CRGFRSDTFVGNSLVDMYSK 357
           +M S + ++P+ LT +S+L AC+    V+ G +V + +I   G   +    + +VDM S+
Sbjct: 559 QMKS-HEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSR 617

Query: 358 CIDADSAFKIFNEMPQ---KNIVSWNSVLS 438
               D A ++   MP+        W ++LS
Sbjct: 618 AGKLDDAMELIRMMPETFRAGASVWGALLS 647



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/70 (37%), Positives = 46/70 (65%)
 Frame = +1

Query: 232 ILKACAGITDVDSGRAVHRYVICRGFRSDTFVGNSLVDMYSKCIDADSAFKIFNEMPQKN 411
           +LKAC+ ++ +D G+ +H  +I   F S T +GNS+++ Y KC + D+A  +F+ M  ++
Sbjct: 71  VLKACSYLSYID-GKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRD 129

Query: 412 IVSWNSVLSG 441
            VSWN ++ G
Sbjct: 130 SVSWNVLIHG 139


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