BLASTX nr result

ID: Coptis21_contig00038279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038279
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324841.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002514352.1| transferase, putative [Ricinus communis] gi|...    69   5e-10
ref|XP_002282283.1| PREDICTED: hydroxycinnamoyl-Coenzyme A shiki...    68   7e-10
ref|NP_567826.1| HXXXD-type acyl-transferase-like protein [Arabi...    64   1e-08
emb|CAB79683.1| hypothetical protein [Arabidopsis thaliana]            64   1e-08

>ref|XP_002324841.1| predicted protein [Populus trichocarpa] gi|222866275|gb|EEF03406.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/46 (71%), Positives = 41/46 (89%)
 Frame = -1

Query: 139 MADITYLCKRTVVSTKPVQPGKYHSLSVLDHVMEPSNLRLIFYYYT 2
           MADITY+CKRTVVSTKPVQPGK+ SLSVLD +ME ++LR ++Y+ T
Sbjct: 5   MADITYICKRTVVSTKPVQPGKHCSLSVLDRLMEQNHLRSVYYFRT 50


>ref|XP_002514352.1| transferase, putative [Ricinus communis]
           gi|223546808|gb|EEF48306.1| transferase, putative
           [Ricinus communis]
          Length = 448

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/46 (63%), Positives = 40/46 (86%)
 Frame = -1

Query: 139 MADITYLCKRTVVSTKPVQPGKYHSLSVLDHVMEPSNLRLIFYYYT 2
           MA++TY+CKRTVVSTKPVQPGK+  LSVL  +ME ++LR+++Y+ T
Sbjct: 1   MAEVTYICKRTVVSTKPVQPGKFFPLSVLGRLMERNHLRIVYYFQT 46


>ref|XP_002282283.1| PREDICTED: hydroxycinnamoyl-Coenzyme A shikimate/quinate
           hydroxycinnamoyltransferase [Vitis vinifera]
           gi|296081974|emb|CBI20979.3| unnamed protein product
           [Vitis vinifera]
          Length = 449

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/46 (63%), Positives = 38/46 (82%)
 Frame = -1

Query: 139 MADITYLCKRTVVSTKPVQPGKYHSLSVLDHVMEPSNLRLIFYYYT 2
           MA+I+Y+CKRTVVSTKPVQPGK H LS LD  M+ + +R+++YY T
Sbjct: 1   MAEISYICKRTVVSTKPVQPGKTHPLSALDRAMDHNRVRIVYYYRT 46


>ref|NP_567826.1| HXXXD-type acyl-transferase-like protein [Arabidopsis thaliana]
           gi|332660207|gb|AEE85607.1| HXXXD-type
           acyl-transferase-like protein [Arabidopsis thaliana]
          Length = 460

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 24/41 (58%), Positives = 37/41 (90%)
 Frame = -1

Query: 130 ITYLCKRTVVSTKPVQPGKYHSLSVLDHVMEPSNLRLIFYY 8
           + ++CKRTVVST+ ++PG+ + LSVLDHVMEP+++RL++YY
Sbjct: 14  VRFICKRTVVSTRSIEPGRLYQLSVLDHVMEPNHIRLVYYY 54


>emb|CAB79683.1| hypothetical protein [Arabidopsis thaliana]
          Length = 414

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 24/41 (58%), Positives = 37/41 (90%)
 Frame = -1

Query: 130 ITYLCKRTVVSTKPVQPGKYHSLSVLDHVMEPSNLRLIFYY 8
           + ++CKRTVVST+ ++PG+ + LSVLDHVMEP+++RL++YY
Sbjct: 14  VRFICKRTVVSTRSIEPGRLYQLSVLDHVMEPNHIRLVYYY 54


Top