BLASTX nr result
ID: Coptis21_contig00038276
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038276 (237 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig... 78 7e-13 emb|CBI19874.3| unnamed protein product [Vitis vinifera] 78 7e-13 emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera] 78 7e-13 ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus c... 75 4e-12 ref|XP_003591660.1| U-box domain-containing protein [Medicago tr... 70 2e-10 >ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis vinifera] Length = 1494 Score = 78.2 bits (191), Expect = 7e-13 Identities = 41/60 (68%), Positives = 47/60 (78%) Frame = +2 Query: 2 ETLIEALRRKAFPISQIMALDAFSSLSGRLTASGKSLTEARLLKSAGLDQSYNALLKAEK 181 E L+EAL +K FP SQIMALDA SLSG LT SGKS TEA LLK AG DQ Y+AL+K+E+ Sbjct: 979 EALVEALHKKDFPHSQIMALDALLSLSGHLTTSGKSYTEAWLLKIAGYDQPYHALMKSER 1038 >emb|CBI19874.3| unnamed protein product [Vitis vinifera] Length = 1510 Score = 78.2 bits (191), Expect = 7e-13 Identities = 41/60 (68%), Positives = 47/60 (78%) Frame = +2 Query: 2 ETLIEALRRKAFPISQIMALDAFSSLSGRLTASGKSLTEARLLKSAGLDQSYNALLKAEK 181 E L+EAL +K FP SQIMALDA SLSG LT SGKS TEA LLK AG DQ Y+AL+K+E+ Sbjct: 995 EALVEALHKKDFPHSQIMALDALLSLSGHLTTSGKSYTEAWLLKIAGYDQPYHALMKSER 1054 >emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera] Length = 1494 Score = 78.2 bits (191), Expect = 7e-13 Identities = 41/60 (68%), Positives = 47/60 (78%) Frame = +2 Query: 2 ETLIEALRRKAFPISQIMALDAFSSLSGRLTASGKSLTEARLLKSAGLDQSYNALLKAEK 181 E L+EAL +K FP SQIMALDA SLSG LT SGKS TEA LLK AG DQ Y+AL+K+E+ Sbjct: 979 EALVEALHKKDFPHSQIMALDALLSLSGHLTTSGKSYTEAWLLKIAGYDQPYHALMKSER 1038 >ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus communis] gi|223551243|gb|EEF52729.1| hypothetical protein RCOM_1598060 [Ricinus communis] Length = 1427 Score = 75.5 bits (184), Expect = 4e-12 Identities = 41/59 (69%), Positives = 46/59 (77%) Frame = +2 Query: 2 ETLIEALRRKAFPISQIMALDAFSSLSGRLTASGKSLTEARLLKSAGLDQSYNALLKAE 178 ETLIEAL +K F SQ+MALDA SLSGRLT+SG+ EA LLK AG DQ YNAL+KAE Sbjct: 908 ETLIEALHKKEFSNSQMMALDALVSLSGRLTSSGRYYLEAWLLKIAGYDQPYNALMKAE 966 >ref|XP_003591660.1| U-box domain-containing protein [Medicago truncatula] gi|358346073|ref|XP_003637097.1| U-box domain-containing protein [Medicago truncatula] gi|355480708|gb|AES61911.1| U-box domain-containing protein [Medicago truncatula] gi|355503032|gb|AES84235.1| U-box domain-containing protein [Medicago truncatula] Length = 1490 Score = 70.1 bits (170), Expect = 2e-10 Identities = 38/63 (60%), Positives = 45/63 (71%) Frame = +2 Query: 2 ETLIEALRRKAFPISQIMALDAFSSLSGRLTASGKSLTEARLLKSAGLDQSYNALLKAEK 181 ETLIEAL +K F +Q+ ALDA L G +T+SGKS TEA LLK AG DQ YN L+KAE+ Sbjct: 978 ETLIEALWQKDFSNNQMKALDALLFLIGHVTSSGKSYTEAGLLKIAGFDQPYNVLMKAEQ 1037 Query: 182 QAH 190 H Sbjct: 1038 LGH 1040