BLASTX nr result
ID: Coptis21_contig00038272
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038272 (298 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002518803.1| pentatricopeptide repeat-containing protein,... 134 1e-29 ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat... 132 4e-29 ref|XP_002315826.1| predicted protein [Populus trichocarpa] gi|2... 124 6e-27 gb|ADQ43199.1| unknown [Eutrema parvulum] 120 9e-26 ref|NP_178323.3| tetratricopeptide repeat-containing protein [Ar... 120 9e-26 >ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 775 Score = 134 bits (336), Expect = 1e-29 Identities = 64/99 (64%), Positives = 77/99 (77%) Frame = +2 Query: 2 GFCYTIECYCILVHILFRARMYFDAQEVLKNMISSRQVLSNGLNVFDVLWLTKDFCHSGY 181 GFC T E YC+LVHILF ARMYFDA LK +ISSR++L G +VF+VLW T++ C G+ Sbjct: 124 GFCLTTESYCLLVHILFYARMYFDANFFLKELISSRRILP-GFDVFEVLWSTRNVCVPGF 182 Query: 182 GVFDALFGVLIELGLLEEANECFLRMRKFKVFVKPRSCN 298 GVFDALF V IELG+LEEA +CF RM +F+VF K RSCN Sbjct: 183 GVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCN 221 >ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein At2g02150-like [Vitis vinifera] Length = 755 Score = 132 bits (331), Expect = 4e-29 Identities = 65/99 (65%), Positives = 78/99 (78%) Frame = +2 Query: 2 GFCYTIECYCILVHILFRARMYFDAQEVLKNMISSRQVLSNGLNVFDVLWLTKDFCHSGY 181 GF +T E YCILVHILF AR Y DA VLK +I R+VL + +VFD+LW T++ C G+ Sbjct: 127 GFQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSW-DVFDLLWATRNVCVPGF 185 Query: 182 GVFDALFGVLIELGLLEEANECFLRMRKFKVFVKPRSCN 298 GVFDALF LIELG+LEEA+ECFL+MRKF+VF KPRSCN Sbjct: 186 GVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCN 224 >ref|XP_002315826.1| predicted protein [Populus trichocarpa] gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa] Length = 636 Score = 124 bits (312), Expect = 6e-27 Identities = 60/99 (60%), Positives = 74/99 (74%) Frame = +2 Query: 2 GFCYTIECYCILVHILFRARMYFDAQEVLKNMISSRQVLSNGLNVFDVLWLTKDFCHSGY 181 GF +T E YCILVHILF ARMYF A +LK ++ S VL G +VF++LW T++ C G+ Sbjct: 4 GFRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLP-GSDVFEILWTTRNVCVPGF 62 Query: 182 GVFDALFGVLIELGLLEEANECFLRMRKFKVFVKPRSCN 298 GVFDALF VL+ELG+LE A +CFLRM KF+V K RSCN Sbjct: 63 GVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCN 101 >gb|ADQ43199.1| unknown [Eutrema parvulum] Length = 1128 Score = 120 bits (302), Expect = 9e-26 Identities = 56/99 (56%), Positives = 75/99 (75%) Frame = +2 Query: 2 GFCYTIECYCILVHILFRARMYFDAQEVLKNMISSRQVLSNGLNVFDVLWLTKDFCHSGY 181 GF +TIE YCI+ HILF ARMY+DA +L+ ++ S+ L +VFD LW T++ C G+ Sbjct: 5 GFNHTIESYCIVAHILFCARMYYDANSILREIVLSKAELEE-CDVFDELWSTRNVCVPGF 63 Query: 182 GVFDALFGVLIELGLLEEANECFLRMRKFKVFVKPRSCN 298 GVFDALF VLI+LG+LEEA +CF +M++F+VF K RSCN Sbjct: 64 GVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCN 102 >ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At2g02150 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 761 Score = 120 bits (302), Expect = 9e-26 Identities = 57/99 (57%), Positives = 75/99 (75%) Frame = +2 Query: 2 GFCYTIECYCILVHILFRARMYFDAQEVLKNMISSRQVLSNGLNVFDVLWLTKDFCHSGY 181 GF +++E YCI+ HILF ARMY+DA VLK M+ S+ +VFDVLW T++ C G+ Sbjct: 137 GFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKA----DCDVFDVLWSTRNVCVPGF 192 Query: 182 GVFDALFGVLIELGLLEEANECFLRMRKFKVFVKPRSCN 298 GVFDALF VLI+LG+LEEA +CF +M++F+VF K RSCN Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCN 231