BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038272
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518803.1| pentatricopeptide repeat-containing protein,...   134   1e-29
ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat...   132   4e-29
ref|XP_002315826.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
gb|ADQ43199.1| unknown [Eutrema parvulum]                             120   9e-26
ref|NP_178323.3| tetratricopeptide repeat-containing protein [Ar...   120   9e-26

>ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542184|gb|EEF43728.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 775

 Score =  134 bits (336), Expect = 1e-29
 Identities = 64/99 (64%), Positives = 77/99 (77%)
 Frame = +2

Query: 2   GFCYTIECYCILVHILFRARMYFDAQEVLKNMISSRQVLSNGLNVFDVLWLTKDFCHSGY 181
           GFC T E YC+LVHILF ARMYFDA   LK +ISSR++L  G +VF+VLW T++ C  G+
Sbjct: 124 GFCLTTESYCLLVHILFYARMYFDANFFLKELISSRRILP-GFDVFEVLWSTRNVCVPGF 182

Query: 182 GVFDALFGVLIELGLLEEANECFLRMRKFKVFVKPRSCN 298
           GVFDALF V IELG+LEEA +CF RM +F+VF K RSCN
Sbjct: 183 GVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCN 221


>ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/99 (65%), Positives = 78/99 (78%)
 Frame = +2

Query: 2   GFCYTIECYCILVHILFRARMYFDAQEVLKNMISSRQVLSNGLNVFDVLWLTKDFCHSGY 181
           GF +T E YCILVHILF AR Y DA  VLK +I  R+VL +  +VFD+LW T++ C  G+
Sbjct: 127 GFQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSW-DVFDLLWATRNVCVPGF 185

Query: 182 GVFDALFGVLIELGLLEEANECFLRMRKFKVFVKPRSCN 298
           GVFDALF  LIELG+LEEA+ECFL+MRKF+VF KPRSCN
Sbjct: 186 GVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCN 224


>ref|XP_002315826.1| predicted protein [Populus trichocarpa] gi|222864866|gb|EEF01997.1|
           predicted protein [Populus trichocarpa]
          Length = 636

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/99 (60%), Positives = 74/99 (74%)
 Frame = +2

Query: 2   GFCYTIECYCILVHILFRARMYFDAQEVLKNMISSRQVLSNGLNVFDVLWLTKDFCHSGY 181
           GF +T E YCILVHILF ARMYF A  +LK ++ S  VL  G +VF++LW T++ C  G+
Sbjct: 4   GFRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLP-GSDVFEILWTTRNVCVPGF 62

Query: 182 GVFDALFGVLIELGLLEEANECFLRMRKFKVFVKPRSCN 298
           GVFDALF VL+ELG+LE A +CFLRM KF+V  K RSCN
Sbjct: 63  GVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCN 101


>gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/99 (56%), Positives = 75/99 (75%)
 Frame = +2

Query: 2   GFCYTIECYCILVHILFRARMYFDAQEVLKNMISSRQVLSNGLNVFDVLWLTKDFCHSGY 181
           GF +TIE YCI+ HILF ARMY+DA  +L+ ++ S+  L    +VFD LW T++ C  G+
Sbjct: 5   GFNHTIESYCIVAHILFCARMYYDANSILREIVLSKAELEE-CDVFDELWSTRNVCVPGF 63

Query: 182 GVFDALFGVLIELGLLEEANECFLRMRKFKVFVKPRSCN 298
           GVFDALF VLI+LG+LEEA +CF +M++F+VF K RSCN
Sbjct: 64  GVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCN 102


>ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546751|sp|P0C894.1|PP143_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At2g02150 gi|330250459|gb|AEC05553.1|
           tetratricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 761

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/99 (57%), Positives = 75/99 (75%)
 Frame = +2

Query: 2   GFCYTIECYCILVHILFRARMYFDAQEVLKNMISSRQVLSNGLNVFDVLWLTKDFCHSGY 181
           GF +++E YCI+ HILF ARMY+DA  VLK M+ S+       +VFDVLW T++ C  G+
Sbjct: 137 GFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKA----DCDVFDVLWSTRNVCVPGF 192

Query: 182 GVFDALFGVLIELGLLEEANECFLRMRKFKVFVKPRSCN 298
           GVFDALF VLI+LG+LEEA +CF +M++F+VF K RSCN
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCN 231