BLASTX nr result

ID: Coptis21_contig00038266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038266
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABX10439.1| 3-ketoacyl-CoA synthase 3 [Gossypium hirsutum]         234   5e-60
ref|XP_002284511.2| PREDICTED: 3-ketoacyl-CoA synthase 12, parti...   233   1e-59
gb|ABX10441.1| 3-ketoacyl-CoA synthase 6 [Gossypium hirsutum]         233   1e-59
emb|CAN62551.1| hypothetical protein VITISV_002308 [Vitis vinifera]   233   1e-59
ref|NP_180431.1| 3-ketoacyl-CoA synthase 12 [Arabidopsis thalian...   232   3e-59

>gb|ABX10439.1| 3-ketoacyl-CoA synthase 3 [Gossypium hirsutum]
          Length = 466

 Score =  234 bits (597), Expect = 5e-60
 Identities = 106/151 (70%), Positives = 136/151 (90%)
 Frame = -2

Query: 453 FNLTGMGCSASLISIDIVQNVFKSYKKAFAIVVTSESLAPNWYVGNNRSMILANCLFRSG 274
           FNLTGMGCSASLIS+DIV+NVFKSYK  +A++VTSESL+PNWY GN+RSMILANCLFRSG
Sbjct: 161 FNLTGMGCSASLISLDIVRNVFKSYKNKYALLVTSESLSPNWYAGNDRSMILANCLFRSG 220

Query: 273 GCSILLTNNRYLRDQAMLELKCLVRTHLGANDEAYHCCVQTEDEDGRTGFHLSKELPKSA 94
           GC+ILLTNN+ L+ +AM +LKCLVRTH GA DE+Y+CC+Q EDE G+ GF+L K LPK+A
Sbjct: 221 GCAILLTNNKSLKHRAMFKLKCLVRTHHGARDESYNCCIQREDEIGKVGFYLGKNLPKAA 280

Query: 93  TRAFIENLKVIAPKILPISELLRYVIVSHIQ 1
           TR+F++NL+VI PKILP++EL+R+++VS ++
Sbjct: 281 TRSFVDNLRVITPKILPVTELVRFMVVSLVK 311


>ref|XP_002284511.2| PREDICTED: 3-ketoacyl-CoA synthase 12, partial [Vitis vinifera]
          Length = 556

 Score =  233 bits (594), Expect = 1e-59
 Identities = 108/151 (71%), Positives = 134/151 (88%)
 Frame = -2

Query: 453 FNLTGMGCSASLISIDIVQNVFKSYKKAFAIVVTSESLAPNWYVGNNRSMILANCLFRSG 274
           FNLTGMGCSASLISI+IVQN+FKSYK  +A+VVTSESL+PNWY GN+RSMIL+NCLFRSG
Sbjct: 247 FNLTGMGCSASLISINIVQNLFKSYKNMYALVVTSESLSPNWYTGNDRSMILSNCLFRSG 306

Query: 273 GCSILLTNNRYLRDQAMLELKCLVRTHLGANDEAYHCCVQTEDEDGRTGFHLSKELPKSA 94
           GC++LLTN R LR +AML+L+CLVRTH GA DE++ CC+Q ED+ GR GF L+K LPK+A
Sbjct: 307 GCAVLLTNKRALRHRAMLKLRCLVRTHHGAKDESFGCCIQKEDDQGRLGFFLNKSLPKAA 366

Query: 93  TRAFIENLKVIAPKILPISELLRYVIVSHIQ 1
           TRAFI+NL+VI+PKILP+ ELLRY++ S ++
Sbjct: 367 TRAFIDNLRVISPKILPVRELLRYMVASLVR 397


>gb|ABX10441.1| 3-ketoacyl-CoA synthase 6 [Gossypium hirsutum]
          Length = 467

 Score =  233 bits (594), Expect = 1e-59
 Identities = 106/148 (71%), Positives = 132/148 (89%)
 Frame = -2

Query: 453 FNLTGMGCSASLISIDIVQNVFKSYKKAFAIVVTSESLAPNWYVGNNRSMILANCLFRSG 274
           FNLTGMGCSASLIS+DIV+NVFKSYK  FA++VTSESL+PNWY GN+RSMIL+NCLFRSG
Sbjct: 161 FNLTGMGCSASLISLDIVRNVFKSYKNKFALLVTSESLSPNWYAGNDRSMILSNCLFRSG 220

Query: 273 GCSILLTNNRYLRDQAMLELKCLVRTHLGANDEAYHCCVQTEDEDGRTGFHLSKELPKSA 94
           GC++LLTNN+ L+ +AM +LKCLVRTH GA DE+Y CC+Q ED+ G+ GFHLSK LPK+A
Sbjct: 221 GCAVLLTNNKSLKHRAMFKLKCLVRTHHGAKDESYGCCIQREDDKGKMGFHLSKSLPKAA 280

Query: 93  TRAFIENLKVIAPKILPISELLRYVIVS 10
           TR+F++NL+VI PKILP+ EL+R++ VS
Sbjct: 281 TRSFVDNLRVITPKILPVRELVRFMAVS 308


>emb|CAN62551.1| hypothetical protein VITISV_002308 [Vitis vinifera]
          Length = 467

 Score =  233 bits (594), Expect = 1e-59
 Identities = 108/151 (71%), Positives = 134/151 (88%)
 Frame = -2

Query: 453 FNLTGMGCSASLISIDIVQNVFKSYKKAFAIVVTSESLAPNWYVGNNRSMILANCLFRSG 274
           FNLTGMGCSASLISI+IVQN+FKSYK  +A+VVTSESL+PNWY GN+RSMIL+NCLFRSG
Sbjct: 161 FNLTGMGCSASLISINIVQNLFKSYKNMYALVVTSESLSPNWYTGNDRSMILSNCLFRSG 220

Query: 273 GCSILLTNNRYLRDQAMLELKCLVRTHLGANDEAYHCCVQTEDEDGRTGFHLSKELPKSA 94
           GC++LLTN R LR +AML+L+CLVRTH GA DE++ CC+Q ED+ GR GF L+K LPK+A
Sbjct: 221 GCAVLLTNKRALRHRAMLKLRCLVRTHHGAKDESFGCCIQKEDDQGRLGFFLNKSLPKAA 280

Query: 93  TRAFIENLKVIAPKILPISELLRYVIVSHIQ 1
           TRAFI+NL+VI+PKILP+ ELLRY++ S ++
Sbjct: 281 TRAFIDNLRVISPKILPVRELLRYMVASLVR 311


>ref|NP_180431.1| 3-ketoacyl-CoA synthase 12 [Arabidopsis thaliana]
           gi|75206074|sp|Q9SIB2.1|KCS12_ARATH RecName:
           Full=3-ketoacyl-CoA synthase 12; Short=KCS-12; AltName:
           Full=Very long-chain fatty acid condensing enzyme 12;
           Short=VLCFA condensing enzyme 12; Flags: Precursor
           gi|4580394|gb|AAD24372.1| putative fatty acid elongase
           [Arabidopsis thaliana] gi|15810263|gb|AAL07019.1|
           putative fatty acid elongase [Arabidopsis thaliana]
           gi|20259583|gb|AAM14134.1| putative fatty acid elongase
           [Arabidopsis thaliana] gi|330253058|gb|AEC08152.1|
           3-ketoacyl-CoA synthase 12 [Arabidopsis thaliana]
          Length = 476

 Score =  232 bits (591), Expect = 3e-59
 Identities = 106/146 (72%), Positives = 128/146 (87%)
 Frame = -2

Query: 453 FNLTGMGCSASLISIDIVQNVFKSYKKAFAIVVTSESLAPNWYVGNNRSMILANCLFRSG 274
           FNLTGMGCSASLIS+DIV+N+FKSY    A+V TSESL+PNWY GNNRSMILANCLFRSG
Sbjct: 161 FNLTGMGCSASLISVDIVKNIFKSYANKLALVATSESLSPNWYSGNNRSMILANCLFRSG 220

Query: 273 GCSILLTNNRYLRDQAMLELKCLVRTHLGANDEAYHCCVQTEDEDGRTGFHLSKELPKSA 94
           GC+ILLTN R LR +AM +LKC+VRTH GA +E+Y+CC+Q EDE GR GF+L K LPK+A
Sbjct: 221 GCAILLTNKRSLRKKAMFKLKCMVRTHHGAREESYNCCIQAEDEQGRVGFYLGKNLPKAA 280

Query: 93  TRAFIENLKVIAPKILPISELLRYVI 16
           TRAF+ENLKVI PKILP++EL+R+++
Sbjct: 281 TRAFVENLKVITPKILPVTELIRFML 306


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