BLASTX nr result

ID: Coptis21_contig00038265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038265
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN88916.1| glutamyl tRNA Reductase [Nicotiana tabacum]           155   3e-36
emb|CBI19316.3| unnamed protein product [Vitis vinifera]              155   4e-36
ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precu...   155   4e-36
ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloro...   155   4e-36
ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRN...   153   2e-35

>emb|CAN88916.1| glutamyl tRNA Reductase [Nicotiana tabacum]
          Length = 542

 Score =  155 bits (392), Expect = 3e-36
 Identities = 80/110 (72%), Positives = 98/110 (89%)
 Frame = -2

Query: 334 HLFEVSAGLDSLILGDEQILGRVKQVVNFGEGVTGFGRNLNGLFRYALCVGADVRTKTNI 155
           HLFEVSAGLDSL+LG+ QIL +VKQVV  G+GVTGFGRN++GLF++A+ VG  VRT+TNI
Sbjct: 190 HLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVTGFGRNISGLFKHAITVGKRVRTETNI 249

Query: 154 ASGPIISVSSAAVELAIIKLPRNLSSTARVLVIGAGKMGKLVIKHLVAKG 5
           A+G  +SVSSAAVELA++KLP +  ++AR+LVIGAGKMGKLVIKHLVAKG
Sbjct: 250 AAG-AVSVSSAAVELALMKLPESSHASARMLVIGAGKMGKLVIKHLVAKG 298


>emb|CBI19316.3| unnamed protein product [Vitis vinifera]
          Length = 510

 Score =  155 bits (391), Expect = 4e-36
 Identities = 80/110 (72%), Positives = 97/110 (88%)
 Frame = -2

Query: 334 HLFEVSAGLDSLILGDEQILGRVKQVVNFGEGVTGFGRNLNGLFRYALCVGADVRTKTNI 155
           HLFEVSAGLDSL+LG+ QIL +VKQVV  G+GV GFGRN++GLF++A+ VG  VRT+TNI
Sbjct: 193 HLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAITVGKRVRTETNI 252

Query: 154 ASGPIISVSSAAVELAIIKLPRNLSSTARVLVIGAGKMGKLVIKHLVAKG 5
           A+G  +SVSSAAVELA++KLP +  +TAR+LVIGAGKMGKLVIKHLVAKG
Sbjct: 253 AAG-AVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKG 301


>ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precursor, putative [Ricinus
           communis] gi|223550696|gb|EEF52182.1| Glutamyl-tRNA
           reductase 1, chloroplast precursor, putative [Ricinus
           communis]
          Length = 565

 Score =  155 bits (391), Expect = 4e-36
 Identities = 80/110 (72%), Positives = 97/110 (88%)
 Frame = -2

Query: 334 HLFEVSAGLDSLILGDEQILGRVKQVVNFGEGVTGFGRNLNGLFRYALCVGADVRTKTNI 155
           HLFEVSAGLDSL+LG+ QIL +VKQVV  G+GV GFGRN++GLF++A+ VG  VRT+TNI
Sbjct: 215 HLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNI 274

Query: 154 ASGPIISVSSAAVELAIIKLPRNLSSTARVLVIGAGKMGKLVIKHLVAKG 5
           A+G  +SVSSAAVELA++KLP +  +TAR+LVIGAGKMGKLVIKHLVAKG
Sbjct: 275 AAG-AVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKG 323


>ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic [Vitis
           vinifera] gi|147816412|emb|CAN77439.1| hypothetical
           protein VITISV_007402 [Vitis vinifera]
          Length = 545

 Score =  155 bits (391), Expect = 4e-36
 Identities = 80/110 (72%), Positives = 97/110 (88%)
 Frame = -2

Query: 334 HLFEVSAGLDSLILGDEQILGRVKQVVNFGEGVTGFGRNLNGLFRYALCVGADVRTKTNI 155
           HLFEVSAGLDSL+LG+ QIL +VKQVV  G+GV GFGRN++GLF++A+ VG  VRT+TNI
Sbjct: 193 HLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAITVGKRVRTETNI 252

Query: 154 ASGPIISVSSAAVELAIIKLPRNLSSTARVLVIGAGKMGKLVIKHLVAKG 5
           A+G  +SVSSAAVELA++KLP +  +TAR+LVIGAGKMGKLVIKHLVAKG
Sbjct: 253 AAG-AVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKG 301


>ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRNA reductase 1,
           chloroplastic-like [Cucumis sativus]
          Length = 552

 Score =  153 bits (386), Expect = 2e-35
 Identities = 79/110 (71%), Positives = 96/110 (87%)
 Frame = -2

Query: 334 HLFEVSAGLDSLILGDEQILGRVKQVVNFGEGVTGFGRNLNGLFRYALCVGADVRTKTNI 155
           H+FEVSAGLDSL+LG+ QIL +VKQVV  G+GV GFGRN++GLF++A+ VG  VRT+TNI
Sbjct: 200 HIFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVAGFGRNISGLFKHAITVGKRVRTETNI 259

Query: 154 ASGPIISVSSAAVELAIIKLPRNLSSTARVLVIGAGKMGKLVIKHLVAKG 5
           A+G  +SVSSAAVELA++KLP    +TAR+LVIGAGKMGKLVIKHLVAKG
Sbjct: 260 AAG-AVSVSSAAVELALMKLPEPSHATARMLVIGAGKMGKLVIKHLVAKG 308


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