BLASTX nr result
ID: Coptis21_contig00038261
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038261 (268 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containi... 145 4e-33 gb|AEK83168.1| At1g74600-like protein [Capsella grandiflora] 133 2e-29 gb|AEK83161.1| At1g74600-like protein [Capsella grandiflora] 132 2e-29 gb|AEK83151.1| At1g74600-like protein [Capsella grandiflora] gi|... 132 2e-29 gb|ACN57373.1| At1g74600-like protein [Capsella rubella] gi|2245... 132 2e-29 >ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Vitis vinifera] gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera] Length = 893 Score = 145 bits (365), Expect = 4e-33 Identities = 67/88 (76%), Positives = 79/88 (89%) Frame = +1 Query: 1 AQHGKGMEALRLFDLMRKKGVEPDSVTFVGVLSACSHSGLVEEGYSHLNSMTKYHGIKPG 180 AQHGKG EAL+++DLMRK+G +PDSVTFVGVLSACSH+G+VEEGYSHLNSM K +GI+PG Sbjct: 727 AQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPG 786 Query: 181 SRHYACMVEILGRSGRLEEAASFIANMP 264 HYACMV++LGRSGRL+EA FI NMP Sbjct: 787 YYHYACMVDLLGRSGRLKEAERFINNMP 814 >gb|AEK83168.1| At1g74600-like protein [Capsella grandiflora] Length = 204 Score = 133 bits (334), Expect = 2e-29 Identities = 62/88 (70%), Positives = 74/88 (84%) Frame = +1 Query: 1 AQHGKGMEALRLFDLMRKKGVEPDSVTFVGVLSACSHSGLVEEGYSHLNSMTKYHGIKPG 180 AQHGK EAL++++LM++KGV+PD VTFVGVLSACSH GLVEEGY HL SM K +GI+P Sbjct: 50 AQHGKATEALQMYNLMKEKGVKPDKVTFVGVLSACSHGGLVEEGYXHLKSMVKDYGIEPE 109 Query: 181 SRHYACMVEILGRSGRLEEAASFIANMP 264 +RHY CMV+ LGRSGRL EA SFI +MP Sbjct: 110 NRHYVCMVDTLGRSGRLREAESFINSMP 137 >gb|AEK83161.1| At1g74600-like protein [Capsella grandiflora] Length = 204 Score = 132 bits (333), Expect = 2e-29 Identities = 62/88 (70%), Positives = 74/88 (84%) Frame = +1 Query: 1 AQHGKGMEALRLFDLMRKKGVEPDSVTFVGVLSACSHSGLVEEGYSHLNSMTKYHGIKPG 180 AQHGK EAL++++LM++KGV+PD VTFVGVLSACSH GLVEEGY HL SM K +GI+P Sbjct: 50 AQHGKATEALQMYNLMKEKGVKPDKVTFVGVLSACSHGGLVEEGYLHLKSMVKDYGIEPE 109 Query: 181 SRHYACMVEILGRSGRLEEAASFIANMP 264 +RHY CMV+ LGRSGRL EA SFI +MP Sbjct: 110 NRHYVCMVDTLGRSGRLREAESFINSMP 137 >gb|AEK83151.1| At1g74600-like protein [Capsella grandiflora] gi|341606099|gb|AEK83152.1| At1g74600-like protein [Capsella grandiflora] gi|341606101|gb|AEK83153.1| At1g74600-like protein [Capsella grandiflora] gi|341606103|gb|AEK83154.1| At1g74600-like protein [Capsella grandiflora] gi|341606105|gb|AEK83155.1| At1g74600-like protein [Capsella grandiflora] gi|341606107|gb|AEK83156.1| At1g74600-like protein [Capsella grandiflora] gi|341606109|gb|AEK83157.1| At1g74600-like protein [Capsella grandiflora] gi|341606111|gb|AEK83158.1| At1g74600-like protein [Capsella grandiflora] gi|341606113|gb|AEK83159.1| At1g74600-like protein [Capsella grandiflora] gi|341606115|gb|AEK83160.1| At1g74600-like protein [Capsella grandiflora] gi|341606119|gb|AEK83162.1| At1g74600-like protein [Capsella grandiflora] gi|341606121|gb|AEK83163.1| At1g74600-like protein [Capsella grandiflora] gi|341607201|gb|AEK83703.1| At1g74600-like protein [Capsella rubella] gi|341607203|gb|AEK83704.1| At1g74600-like protein [Capsella rubella] gi|341607205|gb|AEK83705.1| At1g74600-like protein [Capsella rubella] gi|341607207|gb|AEK83706.1| At1g74600-like protein [Capsella rubella] gi|341607209|gb|AEK83707.1| At1g74600-like protein [Capsella rubella] gi|341607211|gb|AEK83708.1| At1g74600-like protein [Capsella rubella] gi|341607213|gb|AEK83709.1| At1g74600-like protein [Capsella rubella] gi|341607215|gb|AEK83710.1| At1g74600-like protein [Capsella rubella] gi|341607217|gb|AEK83711.1| At1g74600-like protein [Capsella rubella] gi|341607219|gb|AEK83712.1| At1g74600-like protein [Capsella rubella] gi|341607221|gb|AEK83713.1| At1g74600-like protein [Capsella rubella] gi|341607223|gb|AEK83714.1| At1g74600-like protein [Capsella rubella] gi|341607225|gb|AEK83715.1| At1g74600-like protein [Capsella rubella] gi|341607227|gb|AEK83716.1| At1g74600-like protein [Capsella rubella] gi|399107036|gb|AFP20306.1| At1g74600-like protein, partial [Capsella grandiflora] gi|399107038|gb|AFP20307.1| At1g74600-like protein, partial [Capsella grandiflora] gi|399107040|gb|AFP20308.1| At1g74600-like protein, partial [Capsella grandiflora] gi|399107042|gb|AFP20309.1| At1g74600-like protein, partial [Capsella grandiflora] Length = 204 Score = 132 bits (333), Expect = 2e-29 Identities = 62/88 (70%), Positives = 74/88 (84%) Frame = +1 Query: 1 AQHGKGMEALRLFDLMRKKGVEPDSVTFVGVLSACSHSGLVEEGYSHLNSMTKYHGIKPG 180 AQHGK EAL++++LM++KGV+PD VTFVGVLSACSH GLVEEGY HL SM K +GI+P Sbjct: 50 AQHGKATEALQMYNLMKEKGVKPDKVTFVGVLSACSHGGLVEEGYLHLKSMVKDYGIEPE 109 Query: 181 SRHYACMVEILGRSGRLEEAASFIANMP 264 +RHY CMV+ LGRSGRL EA SFI +MP Sbjct: 110 NRHYVCMVDTLGRSGRLREAESFINSMP 137 >gb|ACN57373.1| At1g74600-like protein [Capsella rubella] gi|224577405|gb|ACN57376.1| At1g74600-like protein [Capsella rubella] gi|224577407|gb|ACN57377.1| At1g74600-like protein [Capsella rubella] gi|224577411|gb|ACN57379.1| At1g74600-like protein [Capsella rubella] gi|224577413|gb|ACN57380.1| At1g74600-like protein [Capsella rubella] gi|224577423|gb|ACN57385.1| At1g74600-like protein [Capsella rubella] gi|224577433|gb|ACN57390.1| At1g74600-like protein [Capsella grandiflora] Length = 176 Score = 132 bits (333), Expect = 2e-29 Identities = 62/88 (70%), Positives = 74/88 (84%) Frame = +1 Query: 1 AQHGKGMEALRLFDLMRKKGVEPDSVTFVGVLSACSHSGLVEEGYSHLNSMTKYHGIKPG 180 AQHGK EAL++++LM++KGV+PD VTFVGVLSACSH GLVEEGY HL SM K +GI+P Sbjct: 42 AQHGKATEALQMYNLMKEKGVKPDKVTFVGVLSACSHGGLVEEGYLHLKSMVKDYGIEPE 101 Query: 181 SRHYACMVEILGRSGRLEEAASFIANMP 264 +RHY CMV+ LGRSGRL EA SFI +MP Sbjct: 102 NRHYVCMVDTLGRSGRLREAESFINSMP 129