BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038232
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22241.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...    89   5e-16
ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_002533116.1| pentatricopeptide repeat-containing protein,...    75   5e-12
ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containi...    72   5e-11

>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/111 (40%), Positives = 73/111 (65%)
 Frame = +2

Query: 29   MIASEVSPDSNTLNVMIQVYRADNNSRRVGELLAFMVRNNLSLSISSYRDLLKLMFIQDM 208
            M ++ + PD    N+++  Y   N+ R+V EL+  M+R +L  SIS YR++++L+ +  M
Sbjct: 855  MFSNGLLPDIEICNMLVFGYCQANSVRKVTELIGVMIRKDLGFSISVYRNVVRLLCMNGM 914

Query: 209  VPDALSLKEIVSRETNSMFIVMYNILIFQNFQTGDSSLVTVLLDEMTRKGL 361
            V   L +KE++ RE N   +++YNILI+  FQTG+S LV V+L E+ +KGL
Sbjct: 915  VLPLLRMKELMLRENNFPHLIVYNILIYHLFQTGNSLLVKVILGELHKKGL 965


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Vitis vinifera]
          Length = 1273

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/111 (40%), Positives = 73/111 (65%)
 Frame = +2

Query: 29   MIASEVSPDSNTLNVMIQVYRADNNSRRVGELLAFMVRNNLSLSISSYRDLLKLMFIQDM 208
            M ++ + PD    N+++  Y   N+ R+V EL+  M+R +L  SIS YR++++L+ +  M
Sbjct: 872  MFSNGLLPDIEICNMLVFGYCQANSVRKVTELIGVMIRKDLGFSISVYRNVVRLLCMNGM 931

Query: 209  VPDALSLKEIVSRETNSMFIVMYNILIFQNFQTGDSSLVTVLLDEMTRKGL 361
            V   L +KE++ RE N   +++YNILI+  FQTG+S LV V+L E+ +KGL
Sbjct: 932  VLPLLRMKELMLRENNFPHLIVYNILIYHLFQTGNSLLVKVILGELHKKGL 982


>ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|222866871|gb|EEF04002.1|
            predicted protein [Populus trichocarpa]
          Length = 1158

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/111 (37%), Positives = 72/111 (64%)
 Frame = +2

Query: 29   MIASEVSPDSNTLNVMIQVYRADNNSRRVGELLAFMVRNNLSLSISSYRDLLKLMFIQDM 208
            M++  + PD++  N+++Q +    N ++V ELL  ++R   SL+ISSYR  ++LM ++  
Sbjct: 753  MLSKGLLPDADIYNMLLQQFCHTKNLKKVRELLGVVIRKTASLTISSYRSYVRLMCLEGK 812

Query: 209  VPDALSLKEIVSRETNSMFIVMYNILIFQNFQTGDSSLVTVLLDEMTRKGL 361
            V  ALSLK+++ +E+ S  I++YNILIF     G+S  V  +L+E+  +GL
Sbjct: 813  VDYALSLKKVMVQESKSASIILYNILIFYLLTAGESMHVKKVLNELQEEGL 863


>ref|XP_002533116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527079|gb|EEF29261.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1204

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 42/111 (37%), Positives = 65/111 (58%)
 Frame = +2

Query: 29   MIASEVSPDSNTLNVMIQVYRADNNSRRVGELLAFMVRNNLSLSISSYRDLLKLMFIQDM 208
            M+   + PD+   N++ Q Y   NN ++V ELL+ ++R  LS S+SSY++L +LM +   
Sbjct: 793  MLLKGLLPDAEIYNMLFQGYCQANNWKKVRELLSVLIRKFLSPSVSSYQNLARLMCMHGS 852

Query: 209  VPDALSLKEIVSRETNSMFIVMYNILIFQNFQTGDSSLVTVLLDEMTRKGL 361
               ALSLK ++   +    +V+YNILIF     G+   V  +LDE+  KGL
Sbjct: 853  FTSALSLKVLMLENSRYDSLVIYNILIFHLLSAGNCLHVVRVLDELQEKGL 903


>ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Glycine max]
          Length = 1186

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/109 (35%), Positives = 68/109 (62%)
 Frame = +2

Query: 29   MIASEVSPDSNTLNVMIQVYRADNNSRRVGELLAFMVRNNLSLSISSYRDLLKLMFIQDM 208
            M++  ++PD    N++IQ +   N+ R+VGELL F +R +  LS++SY++L++L+  +  
Sbjct: 788  MLSKGLTPDDELCNIIIQGHCHVNDLRKVGELLGFAIRKDWELSLTSYKNLVRLVCRKGR 847

Query: 209  VPDALSLKEIVSRETNSMFIVMYNILIFQNFQTGDSSLVTVLLDEMTRK 355
            V  ALSLK ++  +     +++YNIL+F   + G+S  V  +L EM  K
Sbjct: 848  VQFALSLKNLMLAQCPLDGLIIYNILMFYLLKDGNSLDVNKILTEMEEK 896