BLASTX nr result

ID: Coptis21_contig00038205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038205
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repe...    73   9e-22
emb|CBI26580.3| unnamed protein product [Vitis vinifera]               73   9e-22
emb|CAN70132.1| hypothetical protein VITISV_030400 [Vitis vinifera]    72   2e-21
ref|XP_002332335.1| predicted protein [Populus trichocarpa] gi|2...    56   5e-15
ref|XP_002321785.1| predicted protein [Populus trichocarpa] gi|2...    54   2e-14

>ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein
           At2g01680-like [Vitis vinifera]
          Length = 450

 Score = 73.2 bits (178), Expect(2) = 9e-22
 Identities = 31/73 (42%), Positives = 53/73 (72%)
 Frame = +2

Query: 263 NTVGFDLSLFFITVLTARFPLRLELQLCLFALTFTYHFSIAAIIPGGRAVIPFIILSFVL 442
           N++GF +SL+ I++LT++FP+R ELQ+CL A+ FTY+ +I  I P    +   I+L+ +L
Sbjct: 362 NSIGFSVSLYMISILTSKFPMRFELQICLLAMFFTYNTAIITISPDNLKIF-LIVLTSIL 420

Query: 443 PITIPFVSSWLRK 481
           P+T+  V+ W+R+
Sbjct: 421 PLTVCLVAKWVRE 433



 Score = 55.8 bits (133), Expect(2) = 9e-22
 Identities = 33/88 (37%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
 Frame = +3

Query: 36  DQLVEYFGFQTGKDSSSNVRDXXXXXXXXXXXXXYQAGLSPPGGVWADDS------KPGD 197
           + LV YF F  G+DS    R              YQ GLSPPGGVW D+S          
Sbjct: 277 NNLVNYFRFHRGRDSPGEARSALLVIAVLVATATYQVGLSPPGGVWQDNSGTNQSNSTAT 336

Query: 198 LKPHIVGKAILSSKSWIQFGSLTQ*DSI 281
            K H  G++I SS   I FG     +SI
Sbjct: 337 NKAHFAGQSIFSSLGIISFGIFVLFNSI 364


>emb|CBI26580.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score = 73.2 bits (178), Expect(2) = 9e-22
 Identities = 31/73 (42%), Positives = 53/73 (72%)
 Frame = +2

Query: 263 NTVGFDLSLFFITVLTARFPLRLELQLCLFALTFTYHFSIAAIIPGGRAVIPFIILSFVL 442
           N++GF +SL+ I++LT++FP+R ELQ+CL A+ FTY+ +I  I P    +   I+L+ +L
Sbjct: 250 NSIGFSVSLYMISILTSKFPMRFELQICLLAMFFTYNTAIITISPDNLKIF-LIVLTSIL 308

Query: 443 PITIPFVSSWLRK 481
           P+T+  V+ W+R+
Sbjct: 309 PLTVCLVAKWVRE 321



 Score = 55.8 bits (133), Expect(2) = 9e-22
 Identities = 33/88 (37%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
 Frame = +3

Query: 36  DQLVEYFGFQTGKDSSSNVRDXXXXXXXXXXXXXYQAGLSPPGGVWADDS------KPGD 197
           + LV YF F  G+DS    R              YQ GLSPPGGVW D+S          
Sbjct: 165 NNLVNYFRFHRGRDSPGEARSALLVIAVLVATATYQVGLSPPGGVWQDNSGTNQSNSTAT 224

Query: 198 LKPHIVGKAILSSKSWIQFGSLTQ*DSI 281
            K H  G++I SS   I FG     +SI
Sbjct: 225 NKAHFAGQSIFSSLGIISFGIFVLFNSI 252


>emb|CAN70132.1| hypothetical protein VITISV_030400 [Vitis vinifera]
          Length = 394

 Score = 72.4 bits (176), Expect(2) = 2e-21
 Identities = 31/73 (42%), Positives = 52/73 (71%)
 Frame = +2

Query: 263 NTVGFDLSLFFITVLTARFPLRLELQLCLFALTFTYHFSIAAIIPGGRAVIPFIILSFVL 442
           N++GF +SL+ I++LT +FP+R ELQ+CL A+ FTY+ +I  I P    +   I+L+ +L
Sbjct: 306 NSIGFSVSLYMISILTXKFPMRFELQICLLAMFFTYNTAIITISPDNLKIF-LIVLTSIL 364

Query: 443 PITIPFVSSWLRK 481
           P+T+  V+ W+R+
Sbjct: 365 PLTVCLVAKWVRE 377



 Score = 55.8 bits (133), Expect(2) = 2e-21
 Identities = 33/88 (37%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
 Frame = +3

Query: 36  DQLVEYFGFQTGKDSSSNVRDXXXXXXXXXXXXXYQAGLSPPGGVWADDS------KPGD 197
           + LV YF F  G+DS    R              YQ GLSPPGGVW D+S          
Sbjct: 221 NNLVNYFRFHRGRDSPGEARSALLVIAVLVATATYQVGLSPPGGVWQDNSGTNQSNSTAT 280

Query: 198 LKPHIVGKAILSSKSWIQFGSLTQ*DSI 281
            K H  G++I SS   I FG     +SI
Sbjct: 281 NKAHFAGQSIFSSLGIISFGIFVLFNSI 308


>ref|XP_002332335.1| predicted protein [Populus trichocarpa] gi|222832582|gb|EEE71059.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score = 55.8 bits (133), Expect(2) = 5e-15
 Identities = 23/47 (48%), Positives = 36/47 (76%)
 Frame = +2

Query: 257 FINTVGFDLSLFFITVLTARFPLRLELQLCLFALTFTYHFSIAAIIP 397
           F N+VGF +SL+ + VLT++FPL+ ELQ+CL A+  TY  +++ I+P
Sbjct: 358 FFNSVGFSMSLYMLYVLTSKFPLQFELQICLLAMYCTYGTALSCIVP 404



 Score = 50.4 bits (119), Expect(2) = 5e-15
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
 Frame = +3

Query: 27  SRLDQLVEYFGFQTGKDSSSNVRDXXXXXXXXXXXXXYQAGLSPPGGVWADDSKP----- 191
           S  D LVEYF F+  +DS S  R              +Q G+ PPGGVW D S P     
Sbjct: 272 SNRDNLVEYFKFKKDRDSPSEARGTLLVIAVLVATATFQVGVGPPGGVWQDTSIPDQKNI 331

Query: 192 -GDLKPHIVGKAILSSKSWIQF 254
             +   H  G++I+++ + + F
Sbjct: 332 TSNNTAHFAGQSIMATTNTVGF 353


>ref|XP_002321785.1| predicted protein [Populus trichocarpa] gi|222868781|gb|EEF05912.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score = 54.3 bits (129), Expect(2) = 2e-14
 Identities = 27/65 (41%), Positives = 41/65 (63%)
 Frame = +2

Query: 257 FINTVGFDLSLFFITVLTARFPLRLELQLCLFALTFTYHFSIAAIIPGGRAVIPFIILSF 436
           F N+VGF +SL+ I VLT+ FPL+ ELQ+CL A+  TY  ++  I P     +P ++ + 
Sbjct: 165 FFNSVGFSMSLYMIYVLTSEFPLQFELQICLLAMYGTYGTALPCIAPSS-LNLPVLLTTT 223

Query: 437 VLPIT 451
           +L  T
Sbjct: 224 ILSST 228



 Score = 50.1 bits (118), Expect(2) = 2e-14
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
 Frame = +3

Query: 24  LSRLDQLVEYFGFQTGKDSSSNVRDXXXXXXXXXXXXXYQAGLSPPGGVWADDSKP---- 191
           LS  + L+EYF F+ G+DS S  R              +Q G++PPGGVW D + P    
Sbjct: 78  LSNGNNLIEYFKFKKGRDSPSEARSTLLVIAVLVATATFQVGVNPPGGVWQDTNIPDHTN 137

Query: 192 --GDLKPHIVGKAILSSKSWIQF 254
                  H  G++I+++ + + F
Sbjct: 138 STSSSNAHFGGQSIMATTNKVGF 160


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