BLASTX nr result

ID: Coptis21_contig00038158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038158
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266688.1| PREDICTED: homeobox-leucine zipper protein P...   145   4e-33
emb|CAN62139.1| hypothetical protein VITISV_039239 [Vitis vinifera]   145   4e-33
gb|AFO11042.1| HD-1D [Gossypium hirsutum]                             144   7e-33
ref|XP_002518520.1| homeobox protein, putative [Ricinus communis...   142   2e-32
gb|AAB37230.1| homeobox protein [Phalaenopsis sp. SM9108]             142   3e-32

>ref|XP_002266688.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR 2
           [Vitis vinifera] gi|302144076|emb|CBI23181.3| unnamed
           protein product [Vitis vinifera]
          Length = 726

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/103 (66%), Positives = 86/103 (83%)
 Frame = +2

Query: 2   GDILRTMYGTNEIEKPMIIELAVAAMEELVRMAQVREPLWLPGPDDSTEILNTEEYFQSF 181
           GD+LR++    E +KPMI+ELAVAAMEEL+RMAQ  EPLW+P  D+STEIL+ +EY ++F
Sbjct: 228 GDLLRSVSLPTEADKPMIVELAVAAMEELIRMAQAGEPLWIPTSDNSTEILSEDEYLRTF 287

Query: 182 PRGIGEKPIDWKSEASRETGLVIMNHTTLVEILMDANQWSNMF 310
           PRGIG KP+  KSEASRET +VIMNH +LVEILMD NQWS++F
Sbjct: 288 PRGIGPKPLGLKSEASRETAVVIMNHISLVEILMDVNQWSSVF 330


>emb|CAN62139.1| hypothetical protein VITISV_039239 [Vitis vinifera]
          Length = 708

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/103 (66%), Positives = 86/103 (83%)
 Frame = +2

Query: 2   GDILRTMYGTNEIEKPMIIELAVAAMEELVRMAQVREPLWLPGPDDSTEILNTEEYFQSF 181
           GD+LR++    E +KPMI+ELAVAAMEEL+RMAQ  EPLW+P  D+STEIL+ +EY ++F
Sbjct: 210 GDLLRSVSLPTEADKPMIVELAVAAMEELIRMAQAGEPLWIPTSDNSTEILSEDEYLRTF 269

Query: 182 PRGIGEKPIDWKSEASRETGLVIMNHTTLVEILMDANQWSNMF 310
           PRGIG KP+  KSEASRET +VIMNH +LVEILMD NQWS++F
Sbjct: 270 PRGIGPKPLGLKSEASRETAVVIMNHISLVEILMDVNQWSSVF 312


>gb|AFO11042.1| HD-1D [Gossypium hirsutum]
          Length = 725

 Score =  144 bits (363), Expect = 7e-33
 Identities = 68/103 (66%), Positives = 87/103 (84%)
 Frame = +2

Query: 2   GDILRTMYGTNEIEKPMIIELAVAAMEELVRMAQVREPLWLPGPDDSTEILNTEEYFQSF 181
           GD+LR++ G  E +KPMI+ELAVAAMEEL+RMAQ  EPLW+PG D+ST++LN +EY ++F
Sbjct: 228 GDLLRSVSGPTEADKPMIVELAVAAMEELIRMAQSGEPLWVPG-DNSTDVLNEDEYLRTF 286

Query: 182 PRGIGEKPIDWKSEASRETGLVIMNHTTLVEILMDANQWSNMF 310
           PRGIG KP+  +SEASRE+ +VIMNH  LVEILMD NQWS++F
Sbjct: 287 PRGIGPKPLGLRSEASRESAVVIMNHVNLVEILMDVNQWSSVF 329


>ref|XP_002518520.1| homeobox protein, putative [Ricinus communis]
           gi|223542365|gb|EEF43907.1| homeobox protein, putative
           [Ricinus communis]
          Length = 727

 Score =  142 bits (359), Expect = 2e-32
 Identities = 66/102 (64%), Positives = 83/102 (81%)
 Frame = +2

Query: 5   DILRTMYGTNEIEKPMIIELAVAAMEELVRMAQVREPLWLPGPDDSTEILNTEEYFQSFP 184
           D LR++ G  E EKPMI+ELAVAAMEEL+RMAQ  +PLW+PG + +TE+LN EEY ++FP
Sbjct: 230 DFLRSITGPTEAEKPMIVELAVAAMEELMRMAQAGDPLWVPGENSTTEVLNEEEYLRAFP 289

Query: 185 RGIGEKPIDWKSEASRETGLVIMNHTTLVEILMDANQWSNMF 310
           RGIG +P+  +SEASRE+ +VIMNH  LVEILMD NQWS +F
Sbjct: 290 RGIGPRPLGLRSEASRESAVVIMNHVNLVEILMDVNQWSTVF 331


>gb|AAB37230.1| homeobox protein [Phalaenopsis sp. SM9108]
          Length = 768

 Score =  142 bits (358), Expect = 3e-32
 Identities = 71/104 (68%), Positives = 83/104 (79%), Gaps = 2/104 (1%)
 Frame = +2

Query: 5   DILRTMYGTNEIEKPMIIELAVAAMEELVRMAQVREPLWL--PGPDDSTEILNTEEYFQS 178
           ++LR++ G  E++KPM+IELAVAAMEEL+RMAQ+ EPLW   PG D   EILN EEY Q+
Sbjct: 263 ELLRSVAGQPEVDKPMVIELAVAAMEELIRMAQLGEPLWTSSPGLDGGNEILNEEEYVQN 322

Query: 179 FPRGIGEKPIDWKSEASRETGLVIMNHTTLVEILMDANQWSNMF 310
           FPRGIG KP   KSEASRET +VIM+H  LVEILMDANQWS MF
Sbjct: 323 FPRGIGPKPFGLKSEASRETAVVIMSHVNLVEILMDANQWSTMF 366


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