BLASTX nr result

ID: Coptis21_contig00038117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038117
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ96374.1| hypothetical protein [Prunus persica]                  111   7e-23
emb|CBI19257.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002283873.1| PREDICTED: uncharacterized protein LOC100250...   106   2e-21
ref|XP_002302342.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_002514035.1| DNA binding protein, putative [Ricinus commu...   100   1e-19

>gb|ABJ96374.1| hypothetical protein [Prunus persica]
          Length = 238

 Score =  111 bits (277), Expect = 7e-23
 Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
 Frame = -2

Query: 490 DKASLLAEVVHQVRELQKLASDVASKEDNGCXXXXXXXXXXTVQWPFPGETDELKMSYCD 311
           DKASLLAEVV  VREL++ A D+A ++   C             WPFPGE+DE  +SYCD
Sbjct: 78  DKASLLAEVVQHVRELRRQAGDLARQDGGSCCGGSTGSEP----WPFPGESDEATVSYCD 133

Query: 310 SADPPTTSTWSRIKVSMCCEDRVDLLKDLSQXXXXXXXXXXXAEMSTIGGRTKSELVIEK 131
                       +K ++CCEDR  L +DL Q           AEM T+GGRTK+ +V++ 
Sbjct: 134 GEA-------RLLKATLCCEDRPGLNRDLIQAIRSVQARAIRAEMMTVGGRTKNVVVMQW 186

Query: 130 ISGGCDEELSLLKRALKSVIDKPMS--GTSQVLFRNKRQRL 14
             GG +EE+  LKRALK+V++   S  G  +++   KR R+
Sbjct: 187 AGGGGEEEVRALKRALKAVVENRASGCGPGRLVLGKKRARV 227


>emb|CBI19257.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  106 bits (264), Expect = 2e-21
 Identities = 68/162 (41%), Positives = 93/162 (57%), Gaps = 2/162 (1%)
 Frame = -2

Query: 490 DKASLLAEVVHQVRELQKLASDVASKEDNGCXXXXXXXXXXTVQWPFPGETDELKMSYCD 311
           DKASLLAEVV  V EL+K A+DVA +  +GC             W FPGETDE+ + Y +
Sbjct: 54  DKASLLAEVVRHVTELRKRAADVAGQNGDGCCSGGGSE-----SWTFPGETDEVTLGYYE 108

Query: 310 SADPPTTSTWSRIKVSMCCEDRVDLLKDLSQXXXXXXXXXXXAEMSTIGGRTKSELVIEK 131
             +         IK ++CCEDR  L +DL+Q           AEM+T+GGRTKS +V+ +
Sbjct: 109 GDE-------RLIKATLCCEDRPSLNRDLTQAIGSVRARVVRAEMATVGGRTKS-VVVMQ 160

Query: 130 ISGGCDEELSLLKRALKSVIDKPMS--GTSQVLFRNKRQRLS 11
             GG + EL  L+RALK+V++   S  G++ V   +KR R S
Sbjct: 161 WGGGGEAELGNLRRALKAVVENRASGFGSTGVFPLHKRPRFS 202


>ref|XP_002283873.1| PREDICTED: uncharacterized protein LOC100250519 [Vitis vinifera]
          Length = 553

 Score =  106 bits (264), Expect = 2e-21
 Identities = 68/162 (41%), Positives = 93/162 (57%), Gaps = 2/162 (1%)
 Frame = -2

Query: 490 DKASLLAEVVHQVRELQKLASDVASKEDNGCXXXXXXXXXXTVQWPFPGETDELKMSYCD 311
           DKASLLAEVV  V EL+K A+DVA +  +GC             W FPGETDE+ + Y +
Sbjct: 399 DKASLLAEVVRHVTELRKRAADVAGQNGDGCCSGGGSE-----SWTFPGETDEVTLGYYE 453

Query: 310 SADPPTTSTWSRIKVSMCCEDRVDLLKDLSQXXXXXXXXXXXAEMSTIGGRTKSELVIEK 131
             +         IK ++CCEDR  L +DL+Q           AEM+T+GGRTKS +V+ +
Sbjct: 454 GDE-------RLIKATLCCEDRPSLNRDLTQAIGSVRARVVRAEMATVGGRTKS-VVVMQ 505

Query: 130 ISGGCDEELSLLKRALKSVIDKPMS--GTSQVLFRNKRQRLS 11
             GG + EL  L+RALK+V++   S  G++ V   +KR R S
Sbjct: 506 WGGGGEAELGNLRRALKAVVENRASGFGSTGVFPLHKRPRFS 547


>ref|XP_002302342.1| predicted protein [Populus trichocarpa] gi|222844068|gb|EEE81615.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  101 bits (251), Expect = 7e-20
 Identities = 65/162 (40%), Positives = 90/162 (55%), Gaps = 3/162 (1%)
 Frame = -2

Query: 490 DKASLLAEVVHQVRELQKLASDVASKEDNGCXXXXXXXXXXTVQWPFPGETDELKMSYCD 311
           DKASLLA+VVH VR+L+  A+  A +  N C             WP+PGE DE  +S C 
Sbjct: 80  DKASLLAQVVHHVRDLKMKAAGSARQYSNNCSSGLEPEE----NWPYPGEVDEATLSCCG 135

Query: 310 SADPPTTSTWSRIKVSMCCEDRVDLLKDLSQXXXXXXXXXXXAEMSTIGGRTKSELVIEK 131
             +         IKVS+CCEDR  L  DL++           AEM T+ GRTKS +V+  
Sbjct: 136 HEE-------KMIKVSVCCEDRPGLHMDLTRAIKSVRARAVRAEMMTVAGRTKSVVVMRW 188

Query: 130 ISG-GCDEELSLLKRALKSVIDKPMSGT--SQVLFRNKRQRL 14
            +G G +E++ +LKRAL +V++   SG+   QV+  NKR R+
Sbjct: 189 DNGSGGEEDVGILKRALNAVVENRASGSGFGQVVQGNKRARV 230


>ref|XP_002514035.1| DNA binding protein, putative [Ricinus communis]
           gi|223547121|gb|EEF48618.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 246

 Score =  100 bits (249), Expect = 1e-19
 Identities = 59/152 (38%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
 Frame = -2

Query: 490 DKASLLAEVVHQVRELQKLASDVASKEDNGCXXXXXXXXXXTVQWPFPGETDELKMSYCD 311
           DKASLLAEVVH V+EL+K A+   ++                  WPFPGE+DE  +SYCD
Sbjct: 79  DKASLLAEVVHHVKELRKQATSQVARGGGETELPDQQY------WPFPGESDEASLSYCD 132

Query: 310 SADPPTTSTWSRIKVSMCCEDRVDLLKDLSQXXXXXXXXXXXAEMSTIGGRTKSELVIEK 131
             +  T      ++VS+CC+DR  L ++L+            AEM T+GGRTKS +V++ 
Sbjct: 133 GPESKT------MRVSVCCDDRPGLNQELADAIRSVHARAVRAEMMTVGGRTKSVVVVQW 186

Query: 130 ISG----GCDEELSLLKRALKSVIDKPMSGTS 47
            +G    G +E++ +L+RA+KSV++   +G+S
Sbjct: 187 GTGGGGRGGEEDVGVLRRAIKSVVENRGAGSS 218


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