BLASTX nr result

ID: Coptis21_contig00038112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038112
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
dbj|BAK06461.1| predicted protein [Hordeum vulgare subsp. vulgare]     90   2e-16
ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PAR...    87   1e-15
ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi...    86   3e-15

>ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|222862012|gb|EEE99554.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
 Frame = +1

Query: 1   RQGFDFNMCIYDGISYLSRVQESAAKQQLENPVSDVYKLKSSLTSSVSDVMFMDRIKSRI 180
           RQGFDFN CI DGISYLSR QESAAK Q+ NP+      +S+ T SV+D +F++RIKS I
Sbjct: 145 RQGFDFNSCINDGISYLSREQESAAKIQMGNPILAKNVTESTSTLSVADSVFVERIKSHI 204

Query: 181 QHWKNACK-----KQSKDTDDALVRSI 246
           ++WK ACK     K+     DALVRS+
Sbjct: 205 KNWKKACKETSTRKEGNQIQDALVRSL 231


>ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|222835296|gb|EEE73731.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 48/87 (55%), Positives = 60/87 (68%), Gaps = 5/87 (5%)
 Frame = +1

Query: 1   RQGFDFNMCIYDGISYLSRVQESAAKQQLENPVSDVYKLKSSLTSSVSDVMFMDRIKSRI 180
           RQGFDFN CI DGISYLSR QES AK Q+ NP+      +S+ T SV+D +F++RIKS I
Sbjct: 145 RQGFDFNSCINDGISYLSREQESTAKIQMGNPILAKNVTESTSTLSVADSVFVERIKSHI 204

Query: 181 QHWKNACK-----KQSKDTDDALVRSI 246
           ++WK ACK     K+     DALVRS+
Sbjct: 205 KNWKKACKETSTRKEGNQIQDALVRSL 231


>dbj|BAK06461.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 595

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/82 (54%), Positives = 59/82 (71%)
 Frame = +1

Query: 1   RQGFDFNMCIYDGISYLSRVQESAAKQQLENPVSDVYKLKSSLTSSVSDVMFMDRIKSRI 180
           R GFDFNMCIYDGISYLSRVQES A+Q+   P   + +   S ++SV+D +F +RIKSRI
Sbjct: 124 RDGFDFNMCIYDGISYLSRVQESLARQKTFTP--HLQQPSPSASTSVADSVFTNRIKSRI 181

Query: 181 QHWKNACKKQSKDTDDALVRSI 246
           Q+W+  C + SK  D +LV S+
Sbjct: 182 QNWRKGCAEPSKTADGSLVSSL 203


>ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
          Length = 619

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/84 (47%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
 Frame = +1

Query: 1   RQGFDFNMCIYDGISYLSRVQESAAKQQLENPVSDVYKLKSSLTSSVSDVMFMDRIKSRI 180
           RQGFDFN C+Y+GISYLSR QESAA+ +L   +  +  +KSS  S+V+D +F++RI+S++
Sbjct: 139 RQGFDFNACVYNGISYLSRAQESAARIRLGTALPSLRVMKSSSPSTVADTVFVERIRSKV 198

Query: 181 QHWKNACKKQ--SKDTDDALVRSI 246
           ++W+ +CK    +K  D+ LV S+
Sbjct: 199 KYWRESCKSSDTNKSRDEELVNSL 222


>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis]
           gi|223533357|gb|EEF35108.1| ribonuclease, putative
           [Ricinus communis]
          Length = 624

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/82 (50%), Positives = 61/82 (74%)
 Frame = +1

Query: 1   RQGFDFNMCIYDGISYLSRVQESAAKQQLENPVSDVYKLKSSLTSSVSDVMFMDRIKSRI 180
           ++GFDFN C+ DGISYLSR QESAA+ +++NP      ++S+ T  V+D +F+ R +SR+
Sbjct: 147 QEGFDFNACVNDGISYLSRAQESAARVRMKNPFLAKDIVESTSTPGVADSVFVQRTRSRV 206

Query: 181 QHWKNACKKQSKDTDDALVRSI 246
           ++WKNAC   S  TD+ALV+S+
Sbjct: 207 KNWKNACTDTS-STDEALVKSL 227


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