BLASTX nr result
ID: Coptis21_contig00038107
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038107 (257 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313448.1| predicted protein [Populus trichocarpa] gi|2... 71 1e-10 ref|NP_187556.1| uncharacterized protein [Arabidopsis thaliana] ... 70 1e-10 ref|XP_002882620.1| hypothetical protein ARALYDRAFT_341087 [Arab... 70 1e-10 emb|CAN80549.1| hypothetical protein VITISV_019389 [Vitis vinifera] 69 4e-10 ref|XP_002281216.1| PREDICTED: uncharacterized protein LOC100243... 69 5e-10 >ref|XP_002313448.1| predicted protein [Populus trichocarpa] gi|222849856|gb|EEE87403.1| predicted protein [Populus trichocarpa] Length = 807 Score = 70.9 bits (172), Expect = 1e-10 Identities = 33/67 (49%), Positives = 47/67 (70%) Frame = -3 Query: 204 TNLEESVITQKQEACIRSKFLKYWCVRVSNEKLMSALKCSVSLGLAVLFGMIFSKENGHW 25 T + S KQ +S ++ W VS+++LM A KCS+SLGLAVLFG+I+SK++G+W Sbjct: 367 TQQKGSSTPSKQTGFFKSTWMSNWSTSVSSKRLMPAFKCSLSLGLAVLFGLIYSKKDGYW 426 Query: 24 SGLTVAV 4 SGL VA+ Sbjct: 427 SGLPVAI 433 >ref|NP_187556.1| uncharacterized protein [Arabidopsis thaliana] gi|6478934|gb|AAF14039.1|AC011436_23 hypothetical protein [Arabidopsis thaliana] gi|6682225|gb|AAF23277.1|AC016661_2 hypothetical protein [Arabidopsis thaliana] gi|332641248|gb|AEE74769.1| uncharacterized protein [Arabidopsis thaliana] Length = 775 Score = 70.5 bits (171), Expect = 1e-10 Identities = 36/83 (43%), Positives = 51/83 (61%) Frame = -3 Query: 252 LRKDQPIRNGATNKQVTNLEESVITQKQEACIRSKFLKYWCVRVSNEKLMSALKCSVSLG 73 LR+D NG T EE + + + KF CV ++ E+ + A KCS+SLG Sbjct: 346 LRQDSKSVNGRTT------EEEIHPANEGLSMARKFWDILCVWMARERFVFAFKCSISLG 399 Query: 72 LAVLFGMIFSKENGHWSGLTVAV 4 LAVLFG++++K NG+WSGLTVA+ Sbjct: 400 LAVLFGILYNKNNGYWSGLTVAI 422 >ref|XP_002882620.1| hypothetical protein ARALYDRAFT_341087 [Arabidopsis lyrata subsp. lyrata] gi|297328460|gb|EFH58879.1| hypothetical protein ARALYDRAFT_341087 [Arabidopsis lyrata subsp. lyrata] Length = 773 Score = 70.5 bits (171), Expect = 1e-10 Identities = 31/77 (40%), Positives = 52/77 (67%) Frame = -3 Query: 234 IRNGATNKQVTNLEESVITQKQEACIRSKFLKYWCVRVSNEKLMSALKCSVSLGLAVLFG 55 +R + + ++N EE + + + + K CV ++ E+ + A KCS+SLGLAVLFG Sbjct: 346 LRQDSKSVNISNTEEEIHPEHEGLSMARKVWDILCVWMARERFVFAFKCSISLGLAVLFG 405 Query: 54 MIFSKENGHWSGLTVAV 4 ++++K+NG+WSGLTVA+ Sbjct: 406 IMYNKKNGYWSGLTVAI 422 >emb|CAN80549.1| hypothetical protein VITISV_019389 [Vitis vinifera] Length = 801 Score = 68.9 bits (167), Expect = 4e-10 Identities = 32/57 (56%), Positives = 40/57 (70%) Frame = -3 Query: 174 KQEACIRSKFLKYWCVRVSNEKLMSALKCSVSLGLAVLFGMIFSKENGHWSGLTVAV 4 KQ+ W ++V +LM ALKCS+SLGLAVLFGMI+SKENG W+GL VA+ Sbjct: 375 KQKGSFLEGVSSXWSMKVDRSRLMPALKCSLSLGLAVLFGMIYSKENGFWAGLPVAI 431 >ref|XP_002281216.1| PREDICTED: uncharacterized protein LOC100243247 [Vitis vinifera] Length = 817 Score = 68.6 bits (166), Expect = 5e-10 Identities = 32/57 (56%), Positives = 40/57 (70%) Frame = -3 Query: 174 KQEACIRSKFLKYWCVRVSNEKLMSALKCSVSLGLAVLFGMIFSKENGHWSGLTVAV 4 KQ+ W ++V +LM ALKCS+SLGLAVLFGMI+SKENG W+GL VA+ Sbjct: 391 KQKGSFLEGVSSSWSMKVDRSRLMPALKCSLSLGLAVLFGMIYSKENGFWAGLPVAI 447