BLASTX nr result
ID: Coptis21_contig00038068
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038068 (524 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleop... 261 6e-68 ref|XP_002271342.2| PREDICTED: heterogeneous nuclear ribonucleop... 261 6e-68 emb|CBI23309.3| unnamed protein product [Vitis vinifera] 261 6e-68 emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera] 261 6e-68 ref|XP_004146582.1| PREDICTED: heterogeneous nuclear ribonucleop... 250 1e-64 >ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1-like [Vitis vinifera] Length = 514 Score = 261 bits (666), Expect = 6e-68 Identities = 130/179 (72%), Positives = 145/179 (81%), Gaps = 5/179 (2%) Frame = +2 Query: 2 SEARANVGIKKGKYIFGCKIISAQPVEMEDTPLDQQHVCRVGVSRGDDAVGNLGETWCSF 181 S AR NVGI GKY FGCKIIS QPV+MEDTP DQQHVCR+G+SRGDDAVGNLGET SF Sbjct: 68 SGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNLGETEHSF 127 Query: 182 GYGGTGKFSNAGKFMNYGETFGVGDTIVCVLNLESKPLASIGFCKNGKWLGIAKEFYA-- 355 G+GGTGKFS AGKF NYGE FGVGDTIVC +NLE+KPLASI F KNGKWLG+AKEF A Sbjct: 128 GFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVAKEFDAGV 187 Query: 356 ---GVVDSPVGGGREWESAIFPHVLLKNVVVEMQFGVEDGLVPDEGFKVWDCAFEHGNA 523 GVVDSP+ WESA+FPHVLLKNV+V++QF E+GLVP+EG+K W A GNA Sbjct: 188 KGLGVVDSPM-RQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWASALYDGNA 245 >ref|XP_002271342.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1-like [Vitis vinifera] Length = 590 Score = 261 bits (666), Expect = 6e-68 Identities = 130/179 (72%), Positives = 145/179 (81%), Gaps = 5/179 (2%) Frame = +2 Query: 2 SEARANVGIKKGKYIFGCKIISAQPVEMEDTPLDQQHVCRVGVSRGDDAVGNLGETWCSF 181 S AR NVGI GKY FGCKIIS QPV+MEDTP DQQHVCR+G+SRGDDAVGNLGET SF Sbjct: 215 SGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNLGETEHSF 274 Query: 182 GYGGTGKFSNAGKFMNYGETFGVGDTIVCVLNLESKPLASIGFCKNGKWLGIAKEFYA-- 355 G+GGTGKFS AGKF NYGE FGVGDTIVC +NLE+KPLASI F KNGKWLG+AKEF A Sbjct: 275 GFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVAKEFDAGV 334 Query: 356 ---GVVDSPVGGGREWESAIFPHVLLKNVVVEMQFGVEDGLVPDEGFKVWDCAFEHGNA 523 GVVDSP+ WESA+FPHVLLKNV+V++QF E+GLVP+EG+K W A GNA Sbjct: 335 KGLGVVDSPM-RQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWASALYDGNA 392 >emb|CBI23309.3| unnamed protein product [Vitis vinifera] Length = 703 Score = 261 bits (666), Expect = 6e-68 Identities = 130/179 (72%), Positives = 145/179 (81%), Gaps = 5/179 (2%) Frame = +2 Query: 2 SEARANVGIKKGKYIFGCKIISAQPVEMEDTPLDQQHVCRVGVSRGDDAVGNLGETWCSF 181 S AR NVGI GKY FGCKIIS QPV+MEDTP DQQHVCR+G+SRGDDAVGNLGET SF Sbjct: 68 SGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNLGETEHSF 127 Query: 182 GYGGTGKFSNAGKFMNYGETFGVGDTIVCVLNLESKPLASIGFCKNGKWLGIAKEFYA-- 355 G+GGTGKFS AGKF NYGE FGVGDTIVC +NLE+KPLASI F KNGKWLG+AKEF A Sbjct: 128 GFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVAKEFDAGV 187 Query: 356 ---GVVDSPVGGGREWESAIFPHVLLKNVVVEMQFGVEDGLVPDEGFKVWDCAFEHGNA 523 GVVDSP+ WESA+FPHVLLKNV+V++QF E+GLVP+EG+K W A GNA Sbjct: 188 KGLGVVDSPM-RQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWASALYDGNA 245 >emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera] Length = 1021 Score = 261 bits (666), Expect = 6e-68 Identities = 130/179 (72%), Positives = 145/179 (81%), Gaps = 5/179 (2%) Frame = +2 Query: 2 SEARANVGIKKGKYIFGCKIISAQPVEMEDTPLDQQHVCRVGVSRGDDAVGNLGETWCSF 181 S AR NVGI GKY FGCKIIS QPV+MEDTP DQQHVCR+G+SRGDDAVGNLGET SF Sbjct: 235 SGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNLGETEHSF 294 Query: 182 GYGGTGKFSNAGKFMNYGETFGVGDTIVCVLNLESKPLASIGFCKNGKWLGIAKEFYA-- 355 G+GGTGKFS AGKF NYGE FGVGDTIVC +NLE+KPLASI F KNGKWLG+AKEF A Sbjct: 295 GFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVAKEFDAGV 354 Query: 356 ---GVVDSPVGGGREWESAIFPHVLLKNVVVEMQFGVEDGLVPDEGFKVWDCAFEHGNA 523 GVVDSP+ WESA+FPHVLLKNV+V++QF E+GLVP+EG+K W A GNA Sbjct: 355 KGLGVVDSPM-RQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWASALYDGNA 412 >ref|XP_004146582.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1-like [Cucumis sativus] Length = 595 Score = 250 bits (638), Expect = 1e-64 Identities = 125/179 (69%), Positives = 140/179 (78%), Gaps = 5/179 (2%) Frame = +2 Query: 2 SEARANVGIKKGKYIFGCKIISAQPVEMEDTPLDQQHVCRVGVSRGDDAVGNLGETWCSF 181 S AR VGI GKY FGCKIIS QPVEM DT DQQH+CRVG+SRGD VGNLGET SF Sbjct: 68 SGARTTVGITGGKYCFGCKIISLQPVEMSDTAPDQQHLCRVGISRGDSPVGNLGETIQSF 127 Query: 182 GYGGTGKFSNAGKFMNYGETFGVGDTIVCVLNLESKPLASIGFCKNGKWLGIAKEFYA-- 355 G+GGTGKFSNAGKF +YGE FG GD+IVC +NLESKPLASIGF KNGKWLG + +F A Sbjct: 128 GFGGTGKFSNAGKFSDYGEKFGFGDSIVCAVNLESKPLASIGFSKNGKWLGTSIQFDAGP 187 Query: 356 ---GVVDSPVGGGREWESAIFPHVLLKNVVVEMQFGVEDGLVPDEGFKVWDCAFEHGNA 523 GVVDSP+ R WESA FPHVLLKNV V++QF +E+GLVP+EGFK W CA + NA Sbjct: 188 RGLGVVDSPLRKCR-WESAFFPHVLLKNVEVQLQFSIEEGLVPEEGFKPWACALDDNNA 245