BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038047
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    77   2e-12
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    77   3e-12
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              76   5e-12
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              76   6e-12
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              76   6e-12

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
 Frame = +3

Query: 132 GKTGNLWVIFKRGLLVRFHCKSKQQLTITC----HDLRITFVHANSYMGPRRSLWRELEQ 299
           GK+G L +++K  + ++     K+ +         +  +T ++       R  LW  L +
Sbjct: 63  GKSGGLALMWKDSVQIKVLQSDKRLIDALLIWQDKEFYLTCIYGEPVQAERGELWERLTR 122

Query: 300 I--STNGPWLVAGDFNCVLSYTEKRGQLRPNRLAMEEFFDATNSCNLLEADHSGMEMTWC 473
           +  S +GPW++ GDFN ++  +EK G       +  EF    NSC L E +HSG + +W 
Sbjct: 123 LGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSGYQFSWY 182

Query: 474 NNQKGARRIVSKIDRMFINNAGTAKYTGWRYKVLRRINSDHSPLVGEYV 620
            N +    +  ++DR   N A    +   +   L++I SDHSPL+   V
Sbjct: 183 GN-RNDELVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLINNLV 230


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1715

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 54/213 (25%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
 Frame = +3

Query: 3   DMDRVHGFDIICLAEPLSKPKADSVFRLGLNNYENSFFHNDEEGKTGNLWVIFKRGLLVR 182
           ++ RV+  D++ L E  +K + +    LG+             G +G L V +K+ L ++
Sbjct: 384 EVQRVYFLDMLFLIE--TKQQDNYTRDLGVKMGFEDMCIISPRGLSGGLVVYWKKHLSIQ 441

Query: 183 FHCKSKQQLTITCHDLRITFVHANSYMG---------PRRSLWRELEQISTN--GPWLVA 329
                 + +     DL + + + N Y+           R  LW +L+++S +  GPW++ 
Sbjct: 442 VISHDVRLV-----DLYVEYKNFNFYLSCIYGHPIPSERHHLWEKLQRVSAHRSGPWMMC 496

Query: 330 GDFNCVLSYTEKRGQLRPNRLAMEEFFDATNSCNLLEADHSGMEMTWCNNQKGARRIVSK 509
           GDFN +L+  EK+G  R +  +++ F +  N CN+ +    G   +W   ++    I S 
Sbjct: 497 GDFNEILNLNEKKGGRRRSIGSLQNFTNMINCCNMKDLKSKGNPYSWVGKRQN-ETIESC 555

Query: 510 IDRMFINNAGTAKYTGWRYKVLRRINSDHSPLV 608
           +DR+FIN+   A +  +  + L    SDH+P++
Sbjct: 556 LDRVFINSDWQASFPAFETEFLPIAGSDHAPVI 588


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
 Frame = +3

Query: 27   DIICLAEPLSKPKADSVF----RLGLNNYENSFFHNDEEGKTGNLWVIFKRGLLVRFHCK 194
            D +CL E +   KA+ +     RLGL N+    F  +  G  G L +++K  L +     
Sbjct: 562  DALCLLE-IRSSKAEKMIALASRLGLTNH----FIVNPLGFAGGLLLLWKPALNLSVISH 616

Query: 195  SKQQL-TITCHDLR---ITFVHANSYMGPRRSLWRELEQI--STNGPWLVAGDFNCVLSY 356
            + Q + T+  H L    ITF +       +   W   +Q+  S   PW+V GD N + + 
Sbjct: 617  NSQAIHTLASHRLGNCFITFAYIRPNTFAKCGFWEYCKQLANSIQSPWMVVGDLNDIATS 676

Query: 357  TEKRGQLRPNRLAMEEFFDATNSCNLLEADHSGMEMTWC---NNQKGARRIVSKIDRMFI 527
             E+ G    N  +++ F DA + C LL+   SG   TWC    N+   RR   ++DR+  
Sbjct: 677  DEQWGSSSLNYTSLQNFVDAYSDCGLLDPGSSGPNFTWCRFIGNRVVQRR---RLDRVLW 733

Query: 528  NNAGTAKYTGWRYKVLRRINSDHSPLV 608
            N +    +   +  VL R+ SDH+P++
Sbjct: 734  NVSAQLTFPEAKVSVLPRLCSDHNPIL 760


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
 Frame = +3

Query: 27  DIICLAEPLSKPKADSVF----RLGLNNYENSFFHNDEEGKTGNLWVIFKRGLLVRFHCK 194
           D +CL E +   KA+ +     RLGL N+    F  +  G  G L +++K  L +     
Sbjct: 30  DALCLLE-IRSSKAEKMIALASRLGLTNH----FIVNPLGFAGGLLLLWKPALNLSVISH 84

Query: 195 SKQQL-TITCHDLR---ITFVHANSYMGPRRSLWRELEQI--STNGPWLVAGDFNCVLSY 356
           + Q + T+  H L    ITF +       +   W   +Q+  S   PW+V GD N + + 
Sbjct: 85  NSQAIHTLASHRLGNCFITFAYIRPNTFAKCRFWEYCKQLANSIQSPWMVVGDLNDIATS 144

Query: 357 TEKRGQLRPNRLAMEEFFDATNSCNLLEADHSGMEMTWC---NNQKGARRIVSKIDRMFI 527
            E+ G    N  +++ F DA + C LL+   SG   TWC    N+   RR   ++DR+  
Sbjct: 145 DEQWGSSSLNYTSLQNFVDAYSDCGLLDPGSSGPNFTWCRFIGNRVVQRR---RLDRVLW 201

Query: 528 NNAGTAKYTGWRYKVLRRINSDHSPLV 608
           N +    +   +  VL R+ SDH+P++
Sbjct: 202 NVSAQLTFPEAKVSVLPRLCSDHNPIL 228


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
 Frame = +3

Query: 27  DIICLAEPLSKPKADSVF----RLGLNNYENSFFHNDEEGKTGNLWVIFKRGLLVRFHCK 194
           D +CL E +   KA+ +     RLGL N+    F  +  G  G L +++K  L +     
Sbjct: 30  DALCLLE-IRSSKAEKMIALASRLGLTNH----FIVNPLGFAGGLLLLWKPALNLSVISH 84

Query: 195 SKQQL-TITCHDLR---ITFVHANSYMGPRRSLWRELEQI--STNGPWLVAGDFNCVLSY 356
           + Q + T+  H L    ITF +       +   W   +Q+  S   PW+V GD N + + 
Sbjct: 85  NSQAIHTLASHRLGNCFITFAYIRPNTFAKCRFWEYCKQLANSIQSPWMVVGDLNDIATS 144

Query: 357 TEKRGQLRPNRLAMEEFFDATNSCNLLEADHSGMEMTWC---NNQKGARRIVSKIDRMFI 527
            E+ G    N  +++ F DA + C LL+   SG   TWC    N+   RR   ++DR+  
Sbjct: 145 DEQWGSSSLNYTSLQNFVDAYSDCGLLDPGSSGPNFTWCRFIGNRVVQRR---RLDRVLW 201

Query: 528 NNAGTAKYTGWRYKVLRRINSDHSPLV 608
           N +    +   +  VL R+ SDH+P++
Sbjct: 202 NVSAQLTFPEAKVSVLPRLCSDHNPIL 228