BLASTX nr result
ID: Coptis21_contig00038047
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038047 (638 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 77 2e-12 gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 77 3e-12 dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 76 5e-12 dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 76 6e-12 dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 76 6e-12 >gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1374 Score = 77.4 bits (189), Expect = 2e-12 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 6/169 (3%) Frame = +3 Query: 132 GKTGNLWVIFKRGLLVRFHCKSKQQLTITC----HDLRITFVHANSYMGPRRSLWRELEQ 299 GK+G L +++K + ++ K+ + + +T ++ R LW L + Sbjct: 63 GKSGGLALMWKDSVQIKVLQSDKRLIDALLIWQDKEFYLTCIYGEPVQAERGELWERLTR 122 Query: 300 I--STNGPWLVAGDFNCVLSYTEKRGQLRPNRLAMEEFFDATNSCNLLEADHSGMEMTWC 473 + S +GPW++ GDFN ++ +EK G + EF NSC L E +HSG + +W Sbjct: 123 LGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSGYQFSWY 182 Query: 474 NNQKGARRIVSKIDRMFINNAGTAKYTGWRYKVLRRINSDHSPLVGEYV 620 N + + ++DR N A + + L++I SDHSPL+ V Sbjct: 183 GN-RNDELVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLINNLV 230 >gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1715 Score = 77.0 bits (188), Expect = 3e-12 Identities = 54/213 (25%), Positives = 103/213 (48%), Gaps = 11/213 (5%) Frame = +3 Query: 3 DMDRVHGFDIICLAEPLSKPKADSVFRLGLNNYENSFFHNDEEGKTGNLWVIFKRGLLVR 182 ++ RV+ D++ L E +K + + LG+ G +G L V +K+ L ++ Sbjct: 384 EVQRVYFLDMLFLIE--TKQQDNYTRDLGVKMGFEDMCIISPRGLSGGLVVYWKKHLSIQ 441 Query: 183 FHCKSKQQLTITCHDLRITFVHANSYMG---------PRRSLWRELEQISTN--GPWLVA 329 + + DL + + + N Y+ R LW +L+++S + GPW++ Sbjct: 442 VISHDVRLV-----DLYVEYKNFNFYLSCIYGHPIPSERHHLWEKLQRVSAHRSGPWMMC 496 Query: 330 GDFNCVLSYTEKRGQLRPNRLAMEEFFDATNSCNLLEADHSGMEMTWCNNQKGARRIVSK 509 GDFN +L+ EK+G R + +++ F + N CN+ + G +W ++ I S Sbjct: 497 GDFNEILNLNEKKGGRRRSIGSLQNFTNMINCCNMKDLKSKGNPYSWVGKRQN-ETIESC 555 Query: 510 IDRMFINNAGTAKYTGWRYKVLRRINSDHSPLV 608 +DR+FIN+ A + + + L SDH+P++ Sbjct: 556 LDRVFINSDWQASFPAFETEFLPIAGSDHAPVI 588 >dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] Length = 1898 Score = 76.3 bits (186), Expect = 5e-12 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%) Frame = +3 Query: 27 DIICLAEPLSKPKADSVF----RLGLNNYENSFFHNDEEGKTGNLWVIFKRGLLVRFHCK 194 D +CL E + KA+ + RLGL N+ F + G G L +++K L + Sbjct: 562 DALCLLE-IRSSKAEKMIALASRLGLTNH----FIVNPLGFAGGLLLLWKPALNLSVISH 616 Query: 195 SKQQL-TITCHDLR---ITFVHANSYMGPRRSLWRELEQI--STNGPWLVAGDFNCVLSY 356 + Q + T+ H L ITF + + W +Q+ S PW+V GD N + + Sbjct: 617 NSQAIHTLASHRLGNCFITFAYIRPNTFAKCGFWEYCKQLANSIQSPWMVVGDLNDIATS 676 Query: 357 TEKRGQLRPNRLAMEEFFDATNSCNLLEADHSGMEMTWC---NNQKGARRIVSKIDRMFI 527 E+ G N +++ F DA + C LL+ SG TWC N+ RR ++DR+ Sbjct: 677 DEQWGSSSLNYTSLQNFVDAYSDCGLLDPGSSGPNFTWCRFIGNRVVQRR---RLDRVLW 733 Query: 528 NNAGTAKYTGWRYKVLRRINSDHSPLV 608 N + + + VL R+ SDH+P++ Sbjct: 734 NVSAQLTFPEAKVSVLPRLCSDHNPIL 760 >dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] Length = 1366 Score = 75.9 bits (185), Expect = 6e-12 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%) Frame = +3 Query: 27 DIICLAEPLSKPKADSVF----RLGLNNYENSFFHNDEEGKTGNLWVIFKRGLLVRFHCK 194 D +CL E + KA+ + RLGL N+ F + G G L +++K L + Sbjct: 30 DALCLLE-IRSSKAEKMIALASRLGLTNH----FIVNPLGFAGGLLLLWKPALNLSVISH 84 Query: 195 SKQQL-TITCHDLR---ITFVHANSYMGPRRSLWRELEQI--STNGPWLVAGDFNCVLSY 356 + Q + T+ H L ITF + + W +Q+ S PW+V GD N + + Sbjct: 85 NSQAIHTLASHRLGNCFITFAYIRPNTFAKCRFWEYCKQLANSIQSPWMVVGDLNDIATS 144 Query: 357 TEKRGQLRPNRLAMEEFFDATNSCNLLEADHSGMEMTWC---NNQKGARRIVSKIDRMFI 527 E+ G N +++ F DA + C LL+ SG TWC N+ RR ++DR+ Sbjct: 145 DEQWGSSSLNYTSLQNFVDAYSDCGLLDPGSSGPNFTWCRFIGNRVVQRR---RLDRVLW 201 Query: 528 NNAGTAKYTGWRYKVLRRINSDHSPLV 608 N + + + VL R+ SDH+P++ Sbjct: 202 NVSAQLTFPEAKVSVLPRLCSDHNPIL 228 >dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] Length = 1366 Score = 75.9 bits (185), Expect = 6e-12 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%) Frame = +3 Query: 27 DIICLAEPLSKPKADSVF----RLGLNNYENSFFHNDEEGKTGNLWVIFKRGLLVRFHCK 194 D +CL E + KA+ + RLGL N+ F + G G L +++K L + Sbjct: 30 DALCLLE-IRSSKAEKMIALASRLGLTNH----FIVNPLGFAGGLLLLWKPALNLSVISH 84 Query: 195 SKQQL-TITCHDLR---ITFVHANSYMGPRRSLWRELEQI--STNGPWLVAGDFNCVLSY 356 + Q + T+ H L ITF + + W +Q+ S PW+V GD N + + Sbjct: 85 NSQAIHTLASHRLGNCFITFAYIRPNTFAKCRFWEYCKQLANSIQSPWMVVGDLNDIATS 144 Query: 357 TEKRGQLRPNRLAMEEFFDATNSCNLLEADHSGMEMTWC---NNQKGARRIVSKIDRMFI 527 E+ G N +++ F DA + C LL+ SG TWC N+ RR ++DR+ Sbjct: 145 DEQWGSSSLNYTSLQNFVDAYSDCGLLDPGSSGPNFTWCRFIGNRVVQRR---RLDRVLW 201 Query: 528 NNAGTAKYTGWRYKVLRRINSDHSPLV 608 N + + + VL R+ SDH+P++ Sbjct: 202 NVSAQLTFPEAKVSVLPRLCSDHNPIL 228