BLASTX nr result

ID: Coptis21_contig00038038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038038
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523964.1| TATA-binding protein-associated factor MOT1,...    91   1e-16
ref|XP_004145845.1| PREDICTED: TATA-binding protein-associated f...    89   3e-16
ref|XP_004160118.1| PREDICTED: LOW QUALITY PROTEIN: TATA-binding...    88   1e-15
gb|AFW79362.1| hypothetical protein ZEAMMB73_340618 [Zea mays]         86   4e-15
ref|XP_003534431.1| PREDICTED: TATA-binding protein-associated f...    84   1e-14

>ref|XP_002523964.1| TATA-binding protein-associated factor MOT1, putative [Ricinus
           communis] gi|223536691|gb|EEF38332.1| TATA-binding
           protein-associated factor MOT1, putative [Ricinus
           communis]
          Length = 1920

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/53 (88%), Positives = 48/53 (90%)
 Frame = +2

Query: 389 MAQQSSRLHRLLTLLDTGSTQATRFEAANQIGAIAKAHPQDLSSFLKKVSVYL 547
           MAQQSSRLHRLLTLLDTGSTQATRF AA QIG IAK+HPQDLSS LKKVS YL
Sbjct: 1   MAQQSSRLHRLLTLLDTGSTQATRFTAARQIGDIAKSHPQDLSSLLKKVSQYL 53


>ref|XP_004145845.1| PREDICTED: TATA-binding protein-associated factor 172-like [Cucumis
           sativus]
          Length = 2052

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/53 (84%), Positives = 48/53 (90%)
 Frame = +2

Query: 389 MAQQSSRLHRLLTLLDTGSTQATRFEAANQIGAIAKAHPQDLSSFLKKVSVYL 547
           MAQQSSRLHRLLTLLDTGSTQATRF AA Q+G IAK+HPQDL+S LKKVS YL
Sbjct: 1   MAQQSSRLHRLLTLLDTGSTQATRFTAARQLGEIAKSHPQDLTSLLKKVSQYL 53


>ref|XP_004160118.1| PREDICTED: LOW QUALITY PROTEIN: TATA-binding protein-associated
           factor 172-like [Cucumis sativus]
          Length = 1657

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = +2

Query: 389 MAQQSSRLHRLLTLLDTGSTQATRFEAANQIGAIAKAHPQDLSSFLKKVSVY 544
           MAQQSSRLHRLLTLLDTGSTQATRF AA Q+G IAK+HPQDL+S LKKVS Y
Sbjct: 1   MAQQSSRLHRLLTLLDTGSTQATRFTAARQLGEIAKSHPQDLTSLLKKVSQY 52


>gb|AFW79362.1| hypothetical protein ZEAMMB73_340618 [Zea mays]
          Length = 2031

 Score = 85.9 bits (211), Expect = 4e-15
 Identities = 43/53 (81%), Positives = 47/53 (88%)
 Frame = +2

Query: 389 MAQQSSRLHRLLTLLDTGSTQATRFEAANQIGAIAKAHPQDLSSFLKKVSVYL 547
           MAQ SSRLHRLLTLLDTGSTQATRF AA QIG IAK+HPQ+L+S LKKVS Y+
Sbjct: 1   MAQNSSRLHRLLTLLDTGSTQATRFAAARQIGEIAKSHPQELNSLLKKVSQYI 53


>ref|XP_003534431.1| PREDICTED: TATA-binding protein-associated factor 172-like isoform
           2 [Glycine max]
          Length = 2064

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 44/53 (83%), Positives = 46/53 (86%)
 Frame = +2

Query: 389 MAQQSSRLHRLLTLLDTGSTQATRFEAANQIGAIAKAHPQDLSSFLKKVSVYL 547
           MAQQSSRL RLLTLLDTGSTQATR  AA QIG IAK+HPQDL+S LKKVS YL
Sbjct: 1   MAQQSSRLQRLLTLLDTGSTQATRLTAARQIGDIAKSHPQDLTSLLKKVSQYL 53


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