BLASTX nr result

ID: Coptis21_contig00038010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038010
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531705.1| PREDICTED: 3-isopropylmalate dehydratase sma...   148   5e-34
ref|XP_003528346.1| PREDICTED: 3-isopropylmalate dehydratase sma...   146   2e-33
ref|XP_002303495.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
gb|ABK96460.1| unknown [Populus trichocarpa x Populus deltoides]      144   6e-33
gb|AFK48906.1| unknown [Medicago truncatula]                          144   8e-33

>ref|XP_003531705.1| PREDICTED: 3-isopropylmalate dehydratase small subunit-like
           [Glycine max]
          Length = 245

 Score =  148 bits (373), Expect = 5e-34
 Identities = 75/101 (74%), Positives = 78/101 (77%)
 Frame = +1

Query: 220 QIIPAEYLTLVPSKPDEYQKLGSYALIGLPEAYQTHFIEHGEDKSKYSIVIGGENFGCGS 399
           QIIPAEYLTLVPSKPDEY+KLGSYALIGLP  Y T FIE GE K+KY+IVIGG NFGCGS
Sbjct: 83  QIIPAEYLTLVPSKPDEYEKLGSYALIGLPATYATRFIEPGEIKTKYAIVIGGANFGCGS 142

Query: 400 SREHXXXXXXXXXXXXXXXXSYARIFFRNSVATGEVYPLES 522
           SREH                SYARIFFRNSVATGEVYPLES
Sbjct: 143 SREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLES 183


>ref|XP_003528346.1| PREDICTED: 3-isopropylmalate dehydratase small subunit-like
           [Glycine max]
          Length = 246

 Score =  146 bits (368), Expect = 2e-33
 Identities = 72/101 (71%), Positives = 77/101 (76%)
 Frame = +1

Query: 220 QIIPAEYLTLVPSKPDEYQKLGSYALIGLPEAYQTHFIEHGEDKSKYSIVIGGENFGCGS 399
           QIIPAEYLTLVPSKPDEY+KLGSYAL+GLP  Y   F++ GE K+KYSIVIGG NFGCGS
Sbjct: 84  QIIPAEYLTLVPSKPDEYEKLGSYALVGLPATYAARFVDPGETKTKYSIVIGGANFGCGS 143

Query: 400 SREHXXXXXXXXXXXXXXXXSYARIFFRNSVATGEVYPLES 522
           SREH                SYARIFFRNSVATGEVYPLES
Sbjct: 144 SREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLES 184


>ref|XP_002303495.1| predicted protein [Populus trichocarpa] gi|222840927|gb|EEE78474.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/101 (71%), Positives = 78/101 (77%)
 Frame = +1

Query: 220 QIIPAEYLTLVPSKPDEYQKLGSYALIGLPEAYQTHFIEHGEDKSKYSIVIGGENFGCGS 399
           QIIPAEYLTLVPSK +EY+KLGSYALIGLP  Y+T FIE  + K+KYSIVIGGENFGCGS
Sbjct: 16  QIIPAEYLTLVPSKQEEYEKLGSYALIGLPATYKTRFIEANQTKTKYSIVIGGENFGCGS 75

Query: 400 SREHXXXXXXXXXXXXXXXXSYARIFFRNSVATGEVYPLES 522
           SREH                SYARIFFRNSVATGE+YPLES
Sbjct: 76  SREHAPVALGAAGAAAVVAESYARIFFRNSVATGEIYPLES 116


>gb|ABK96460.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 255

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/101 (71%), Positives = 78/101 (77%)
 Frame = +1

Query: 220 QIIPAEYLTLVPSKPDEYQKLGSYALIGLPEAYQTHFIEHGEDKSKYSIVIGGENFGCGS 399
           QIIPAEYLTLVPSK +EY+KLGSYALIGLP  Y+T FIE  + K+KYSIVIGGENFGCGS
Sbjct: 91  QIIPAEYLTLVPSKQEEYEKLGSYALIGLPATYKTRFIEANQTKTKYSIVIGGENFGCGS 150

Query: 400 SREHXXXXXXXXXXXXXXXXSYARIFFRNSVATGEVYPLES 522
           SREH                SYARIFFRNSVATGE+YPLES
Sbjct: 151 SREHAPVALGAAGAAAVVAESYARIFFRNSVATGEIYPLES 191


>gb|AFK48906.1| unknown [Medicago truncatula]
          Length = 248

 Score =  144 bits (363), Expect = 8e-33
 Identities = 70/101 (69%), Positives = 78/101 (77%)
 Frame = +1

Query: 220 QIIPAEYLTLVPSKPDEYQKLGSYALIGLPEAYQTHFIEHGEDKSKYSIVIGGENFGCGS 399
           QIIPAE+LTLVPS PDEYQKLGS+ALIGLP++Y   F+E GE K+KYSI+IGG NFGCGS
Sbjct: 86  QIIPAEHLTLVPSNPDEYQKLGSFALIGLPDSYSVRFVESGETKTKYSIIIGGANFGCGS 145

Query: 400 SREHXXXXXXXXXXXXXXXXSYARIFFRNSVATGEVYPLES 522
           SREH                SYA+IFFRNSVATGEVYPLES
Sbjct: 146 SREHAPVALGASGAAAVVAESYAKIFFRNSVATGEVYPLES 186


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