BLASTX nr result

ID: Coptis21_contig00037996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037996
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB82450.1| PBng143 [Vigna radiata]                                66   3e-09
ref|NP_568719.1| putative thiol-disulfide oxidoreductase DCC [Ar...    65   8e-09
ref|XP_002864035.1| hypothetical protein ARALYDRAFT_495066 [Arab...    64   1e-08
ref|XP_002322151.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
gb|AEV41105.1| putative thiol-disulfide oxudoreductase DCC [Oryz...    62   5e-08

>dbj|BAB82450.1| PBng143 [Vigna radiata]
          Length = 221

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
 Frame = -2

Query: 162 NALPTFQHRIRAINTETTVEPKPPVKED----EQWRIKMLYDGECPLCLKEVNMLKER 1
           NALPT  H    + +E TVEP+   K+     + W+IKMLYDG+CPLC++EVNML+ER
Sbjct: 47  NALPTRPHHYIRVISEATVEPEISKKQKNDSPKDWKIKMLYDGDCPLCMREVNMLRER 104


>ref|NP_568719.1| putative thiol-disulfide oxidoreductase DCC [Arabidopsis thaliana]
           gi|75162429|sp|Q8W485.1|Y5010_ARATH RecName:
           Full=Uncharacterized protein At5g50100, mitochondrial;
           Flags: Precursor gi|17065380|gb|AAL32844.1| Unknown
           protein [Arabidopsis thaliana]
           gi|20148617|gb|AAM10199.1| unknown protein [Arabidopsis
           thaliana] gi|21593055|gb|AAM65004.1| unknown
           [Arabidopsis thaliana] gi|332008513|gb|AED95896.1|
           putative thiol-disulfide oxidoreductase DCC [Arabidopsis
           thaliana]
          Length = 214

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
 Frame = -2

Query: 207 SSQGLEHHLQGGRNRNALPT-FQHRIRAINTETTVEPKPPVKEDEQ-----WRIKMLYDG 46
           S + L  H     N   +PT F++++RAI   +T     P+K  E+     W+IKMLYDG
Sbjct: 22  SLRSLSRHFNPNFNHRIIPTGFKYQVRAIQGTSTDPVITPLKNREEPKPQNWKIKMLYDG 81

Query: 45  ECPLCLKEVNMLKER 1
           +CPLC++EVNML ER
Sbjct: 82  DCPLCMREVNMLMER 96


>ref|XP_002864035.1| hypothetical protein ARALYDRAFT_495066 [Arabidopsis lyrata subsp.
           lyrata] gi|297309870|gb|EFH40294.1| hypothetical protein
           ARALYDRAFT_495066 [Arabidopsis lyrata subsp. lyrata]
          Length = 213

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
 Frame = -2

Query: 207 SSQGLEHHLQGGRNRNALPT-FQHRIRAINTETTVEPKPPVKEDEQ-----WRIKMLYDG 46
           S + L +H     N   +PT F++++RAI   +T     P+K  ++     W+IKMLYDG
Sbjct: 21  SLRSLSNHFNPNFNHRIIPTGFKYQVRAIQGTSTDPVITPLKNRDEPKPQNWKIKMLYDG 80

Query: 45  ECPLCLKEVNMLKER 1
           +CPLC++EVNML ER
Sbjct: 81  DCPLCMREVNMLMER 95


>ref|XP_002322151.1| predicted protein [Populus trichocarpa] gi|222869147|gb|EEF06278.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 4/51 (7%)
 Frame = -2

Query: 141 HRIRAINTETTVEPKPPVKEDE----QWRIKMLYDGECPLCLKEVNMLKER 1
           HR+RAI+ E TVEP    K++E     W IKMLYDG+CPLC++EVNML+ER
Sbjct: 1   HRVRAIH-EATVEPLTSNKQNEPQPQNWNIKMLYDGDCPLCMREVNMLRER 50


>gb|AEV41105.1| putative thiol-disulfide oxudoreductase DCC [Oryza officinalis]
          Length = 212

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 4/62 (6%)
 Frame = -2

Query: 174 GRNRNALPTFQHRIRAINTETTVEPKPPVKE----DEQWRIKMLYDGECPLCLKEVNMLK 7
           G +R A P +  R + ++++  V P+P +K+     E WRIKMLYDG+CPLC++EVNMLK
Sbjct: 37  GASRRA-PMYGFRCQ-VHSDVKVGPRPGLKDGENSSESWRIKMLYDGDCPLCMREVNMLK 94

Query: 6   ER 1
           ER
Sbjct: 95  ER 96


Top