BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037990
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat...   159   2e-37
emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]   159   2e-37
ref|XP_003522318.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   139   2e-31
ref|NP_177580.1| pentatricopeptide repeat-containing protein [Ar...   132   4e-29
ref|XP_002887539.1| hypothetical protein ARALYDRAFT_339633 [Arab...   131   7e-29

>ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74400-like [Vitis vinifera]
          Length = 482

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/122 (62%), Positives = 97/122 (79%), Gaps = 8/122 (6%)
 Frame = +2

Query: 2   RDVTSWTSMIVGYALHGEAGEALRLFDDMK--------NQKDGNRKNGLVIPNEVTFIGV 157
           +DVT+WTSMIVG+ALHG+A EAL+LF +MK        N+++G  ++ LV+PN+VTF+GV
Sbjct: 235 KDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEHESSLVLPNDVTFMGV 294

Query: 158 LMACSHAGRVEEGWQHLDSMNKKHGLKPRISHYGCMVDLLCRAGHLNEAYALIMNMPLQP 337
           LMACSHAG VEEG QH  SM + + L+PRISH+GCMVDLLCRAG L EAY  I+ MP++P
Sbjct: 295 LMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVRP 354

Query: 338 NA 343
           NA
Sbjct: 355 NA 356


>emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  159 bits (402), Expect = 2e-37
 Identities = 76/122 (62%), Positives = 97/122 (79%), Gaps = 8/122 (6%)
 Frame = +2

Query: 2    RDVTSWTSMIVGYALHGEAGEALRLFDDMK--------NQKDGNRKNGLVIPNEVTFIGV 157
            +DVT+WTSMIVG+ALHG+A EAL+LF +MK        N+++G  ++ LV+PN+VTF+GV
Sbjct: 813  KDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGV 872

Query: 158  LMACSHAGRVEEGWQHLDSMNKKHGLKPRISHYGCMVDLLCRAGHLNEAYALIMNMPLQP 337
            LMACSHAG VEEG QH  SM + + L+PRISH+GCMVDLLCRAG L EAY  I+ MP++P
Sbjct: 873  LMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVRP 932

Query: 338  NA 343
            NA
Sbjct: 933  NA 934


>ref|XP_003522318.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74400-like [Glycine max]
          Length = 333

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/115 (58%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
 Frame = +2

Query: 2   RDVTSWTSMIVGYALHGEAGEALRLFDDMKNQKDGNRKNGLVIPNEVTFIGVLMACSHAG 181
           +DVT+W SMIVG+A+HG+A EAL+LF +M+++ D      ++ PN+VTFIGVLMACSHAG
Sbjct: 131 KDVTTWISMIVGHAVHGQAREALQLFSEMRDKDDC-----VLTPNDVTFIGVLMACSHAG 185

Query: 182 RVEEGWQHLDSMNKKHGLKPRISHYGCMVDLLCR-AGHLNEAYALIMNMPLQPNA 343
            VEEG  H  SM++ +G++PR +H+GCMVDLLCR  GHL ++Y  IM MP+ PNA
Sbjct: 186 MVEEGKLHFRSMSEVYGIEPREAHFGCMVDLLCRVGGHLRDSYDFIMEMPVPPNA 240


>ref|NP_177580.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169846|sp|Q9CA73.1|PP119_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g74400 gi|12324820|gb|AAG52382.1|AC011765_34
           hypothetical protein; 20273-21661 [Arabidopsis thaliana]
           gi|332197466|gb|AEE35587.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 462

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/113 (55%), Positives = 84/113 (74%)
 Frame = +2

Query: 2   RDVTSWTSMIVGYALHGEAGEALRLFDDMKNQKDGNRKNGLVIPNEVTFIGVLMACSHAG 181
           +DVT++TSMI GYAL+G+A E+L LF  MK       ++ ++ PN+VTFIGVLMACSH+G
Sbjct: 233 KDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQS--QDTVITPNDVTFIGVLMACSHSG 290

Query: 182 RVEEGWQHLDSMNKKHGLKPRISHYGCMVDLLCRAGHLNEAYALIMNMPLQPN 340
            VEEG +H  SM   + LKPR +H+GCMVDL CR+GHL +A+  I  MP++PN
Sbjct: 291 LVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343


>ref|XP_002887539.1| hypothetical protein ARALYDRAFT_339633 [Arabidopsis lyrata subsp.
           lyrata] gi|297333380|gb|EFH63798.1| hypothetical protein
           ARALYDRAFT_339633 [Arabidopsis lyrata subsp. lyrata]
          Length = 665

 Score =  131 bits (329), Expect = 7e-29
 Identities = 64/114 (56%), Positives = 84/114 (73%)
 Frame = +2

Query: 2   RDVTSWTSMIVGYALHGEAGEALRLFDDMKNQKDGNRKNGLVIPNEVTFIGVLMACSHAG 181
           +DVT++T MI GYAL+GEA E+L LF  MK       ++ ++ PN+VTFIGVLMACSH+G
Sbjct: 233 KDVTTYTCMIFGYALNGEAQESLELFKKMKMIDQS--QDTVITPNDVTFIGVLMACSHSG 290

Query: 182 RVEEGWQHLDSMNKKHGLKPRISHYGCMVDLLCRAGHLNEAYALIMNMPLQPNA 343
            VEEG Q+  SM   + LKPR +H+GCMVDL CR+GHL +A+  I  MP++PNA
Sbjct: 291 LVEEGKQYFKSMIVDYNLKPRDAHFGCMVDLFCRSGHLKDAHEFIKQMPIKPNA 344