BLASTX nr result

ID: Coptis21_contig00037976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037976
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-co...   114   6e-24
ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-co...   113   1e-23
emb|CBI15155.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_002514699.1| ATP binding protein, putative [Ricinus commu...   113   1e-23
ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis ...   112   4e-23

>ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Glycine max]
          Length = 1193

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/83 (63%), Positives = 60/83 (72%)
 Frame = -2

Query: 251  PENAVWKKISLCISYRKKEIEYVQCWSITGEPLCKLCQKPCKGKFARSPEIFEHLFCQFS 72
            P +AVW+K+SL     KKE EY Q WS+T EPLCKLCQK C    A++PE FE LFC   
Sbjct: 961  PSDAVWRKVSLRSGLGKKEKEYTQGWSVTDEPLCKLCQKQCLANNAKTPEFFEDLFCNLV 1020

Query: 71   CAEGYRVRTSQRFLREELFKIEH 3
            C E YR+RTS RFLREELFKIEH
Sbjct: 1021 CYEEYRMRTSNRFLREELFKIEH 1043


>ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Vitis vinifera]
          Length = 1280

 Score =  113 bits (283), Expect = 1e-23
 Identities = 49/83 (59%), Positives = 59/83 (71%)
 Frame = -2

Query: 251  PENAVWKKISLCISYRKKEIEYVQCWSITGEPLCKLCQKPCKGKFARSPEIFEHLFCQFS 72
            P NAVWKK+ LC  Y K+  EY Q W++  EPLCKLCQ PCK   A++P+ FE LFC   
Sbjct: 1012 PSNAVWKKVYLCSGYGKRVKEYTQGWTLMDEPLCKLCQTPCKNSNAKTPDFFEDLFCSLG 1071

Query: 71   CAEGYRVRTSQRFLREELFKIEH 3
            C E YR+RTS R LR+ELF+IEH
Sbjct: 1072 CYEEYRIRTSNRSLRQELFQIEH 1094


>emb|CBI15155.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  113 bits (283), Expect = 1e-23
 Identities = 49/83 (59%), Positives = 59/83 (71%)
 Frame = -2

Query: 251  PENAVWKKISLCISYRKKEIEYVQCWSITGEPLCKLCQKPCKGKFARSPEIFEHLFCQFS 72
            P NAVWKK+ LC  Y K+  EY Q W++  EPLCKLCQ PCK   A++P+ FE LFC   
Sbjct: 933  PSNAVWKKVYLCSGYGKRVKEYTQGWTLMDEPLCKLCQTPCKNSNAKTPDFFEDLFCSLG 992

Query: 71   CAEGYRVRTSQRFLREELFKIEH 3
            C E YR+RTS R LR+ELF+IEH
Sbjct: 993  CYEEYRIRTSNRSLRQELFQIEH 1015


>ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis]
            gi|223546303|gb|EEF47805.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1229

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/83 (60%), Positives = 61/83 (73%)
 Frame = -2

Query: 251  PENAVWKKISLCISYRKKEIEYVQCWSITGEPLCKLCQKPCKGKFARSPEIFEHLFCQFS 72
            P  AVWK ++L  SY KKE +Y Q W++  EPLCKLCQ PCKG  A++PE FE LFC  S
Sbjct: 978  PSGAVWKNVNLSSSYGKKEKQYTQGWTLMDEPLCKLCQTPCKGSNAKTPEFFEDLFCNLS 1037

Query: 71   CAEGYRVRTSQRFLREELFKIEH 3
            C E YR+RTS R LR+ELF+IE+
Sbjct: 1038 CYEEYRIRTSSRSLRQELFQIEY 1060


>ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297319162|gb|EFH49584.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1194

 Score =  112 bits (279), Expect = 4e-23
 Identities = 50/83 (60%), Positives = 61/83 (73%)
 Frame = -2

Query: 251  PENAVWKKISLCISYRKKEIEYVQCWSITGEPLCKLCQKPCKGKFARSPEIFEHLFCQFS 72
            PENAVWKK++L   ++KKE EY Q WS++ EPLCKLCQKPCKG  A+ PE FE LFC  +
Sbjct: 955  PENAVWKKVNLRSGHQKKEKEYTQAWSMSNEPLCKLCQKPCKGNNAKEPEYFEDLFCDLA 1014

Query: 71   CAEGYRVRTSQRFLREELFKIEH 3
            C E YR RTS R++R+    IEH
Sbjct: 1015 CYEDYRTRTSSRYIRQ----IEH 1033


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