BLASTX nr result

ID: Coptis21_contig00037967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037967
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283101.1| PREDICTED: origin recognition complex subuni...   155   4e-36
emb|CBI15609.3| unnamed protein product [Vitis vinifera]              155   4e-36
ref|XP_003551665.1| PREDICTED: origin recognition complex subuni...   150   8e-35
ref|XP_003533607.1| PREDICTED: origin recognition complex subuni...   149   2e-34
ref|XP_003623975.1| Origin recognition complex 5 subunit [Medica...   147   9e-34

>ref|XP_002283101.1| PREDICTED: origin recognition complex subunit 5-like [Vitis
           vinifera]
          Length = 541

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/109 (68%), Positives = 88/109 (80%)
 Frame = +1

Query: 4   LFKLHDILKMPEVGLIFISNSSPDTYHLSTGSLEPIPIHFPDYTEDELCQIFLRNQPDPK 183
           LF+L+DIL MPEVGLIFIS  SPD Y+   G +EPIPI FPDYTED L QIF+RNQ +PK
Sbjct: 213 LFELYDILNMPEVGLIFISKVSPDAYYSDRGYVEPIPILFPDYTEDSLRQIFMRNQANPK 272

Query: 184 LYSSFLDVVLKDSCKITRCIDELSIYFKPLYEKYCEPLSDSGRVPNQNM 330
           LYSSFLDVVL+   +ITR +DELS  F PL++KYCEPLSD G VPN++M
Sbjct: 273 LYSSFLDVVLRTFSRITRRVDELSTAFSPLFKKYCEPLSDPGLVPNEDM 321


>emb|CBI15609.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/109 (68%), Positives = 88/109 (80%)
 Frame = +1

Query: 4   LFKLHDILKMPEVGLIFISNSSPDTYHLSTGSLEPIPIHFPDYTEDELCQIFLRNQPDPK 183
           LF+L+DIL MPEVGLIFIS  SPD Y+   G +EPIPI FPDYTED L QIF+RNQ +PK
Sbjct: 196 LFELYDILNMPEVGLIFISKVSPDAYYSDRGYVEPIPILFPDYTEDSLRQIFMRNQANPK 255

Query: 184 LYSSFLDVVLKDSCKITRCIDELSIYFKPLYEKYCEPLSDSGRVPNQNM 330
           LYSSFLDVVL+   +ITR +DELS  F PL++KYCEPLSD G VPN++M
Sbjct: 256 LYSSFLDVVLRTFSRITRRVDELSTAFSPLFKKYCEPLSDPGLVPNEDM 304


>ref|XP_003551665.1| PREDICTED: origin recognition complex subunit 5-like [Glycine max]
          Length = 541

 Score =  150 bits (380), Expect = 8e-35
 Identities = 74/112 (66%), Positives = 89/112 (79%), Gaps = 2/112 (1%)
 Frame = +1

Query: 1   LLFKLHDILKMPEVGLIFISNSSPDTYHLSTGSLEPIPIHFPDYTEDELCQIFLRNQPDP 180
           LLF L+D+L MPEVGLIFIS++SPDT++ + G +EPIPI+FPDYTE+++ QI LRNQ + 
Sbjct: 211 LLFNLYDLLNMPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEEDIRQILLRNQVNQ 270

Query: 181 KLYSSFLDVVLKDSCKITRCIDELSIYFKPLYEKYCEPLSDSGR--VPNQNM 330
           KLYSSFLDV LK  C IT+ ID LS   KPLYEKYCEPLSD G+   PNQ M
Sbjct: 271 KLYSSFLDVSLKSFCGITKQIDHLSAALKPLYEKYCEPLSDKGKGVAPNQEM 322


>ref|XP_003533607.1| PREDICTED: origin recognition complex subunit 5-like [Glycine max]
          Length = 542

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/112 (65%), Positives = 89/112 (79%), Gaps = 2/112 (1%)
 Frame = +1

Query: 1   LLFKLHDILKMPEVGLIFISNSSPDTYHLSTGSLEPIPIHFPDYTEDELCQIFLRNQPDP 180
           LLF L+D+L  PEVGLIFIS++SPDT++ + G +EPIPI+FPDYTE+++ QI LRNQ + 
Sbjct: 212 LLFNLYDLLNTPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEEDIRQILLRNQVNQ 271

Query: 181 KLYSSFLDVVLKDSCKITRCIDELSIYFKPLYEKYCEPLSDSGR--VPNQNM 330
           KLYSSFLDV LK  C IT+ ID+LS   KPLYEKYCEPLSD G+   PNQ M
Sbjct: 272 KLYSSFLDVSLKSFCGITKQIDDLSAALKPLYEKYCEPLSDKGKGVAPNQEM 323


>ref|XP_003623975.1| Origin recognition complex 5 subunit [Medicago truncatula]
           gi|355498990|gb|AES80193.1| Origin recognition complex 5
           subunit [Medicago truncatula]
          Length = 542

 Score =  147 bits (371), Expect = 9e-34
 Identities = 72/112 (64%), Positives = 91/112 (81%), Gaps = 2/112 (1%)
 Frame = +1

Query: 1   LLFKLHDILKMPEVGLIFISNSSPDTYHLSTGSLEPIPIHFPDYTEDELCQIFLRNQPDP 180
           LLF L+D+LKM EVGLIFIS++SPDT++ + G +EPIPI+FPDYTE ++ QI LRNQ + 
Sbjct: 212 LLFNLYDMLKMLEVGLIFISSTSPDTFYTNMGYVEPIPIYFPDYTEGDIRQILLRNQANQ 271

Query: 181 KLYSSFLDVVLKDSCKITRCIDELSIYFKPLYEKYCEPLSDSGR--VPNQNM 330
           KLYSSFLDV LK  C+ITR + ELS   KPL+EKYCEPLSD G+  VP+++M
Sbjct: 272 KLYSSFLDVALKPFCRITRQVGELSTALKPLFEKYCEPLSDKGKGVVPSEDM 323


Top