BLASTX nr result

ID: Coptis21_contig00037933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037933
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95302.1| unknown [Populus trichocarpa]                          107   1e-21
ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus co...   106   2e-21
ref|XP_003554576.1| PREDICTED: bifunctional aminoacyl-tRNA synth...   105   5e-21
ref|XP_003521619.1| PREDICTED: bifunctional aminoacyl-tRNA synth...   105   5e-21
ref|NP_084011.1| bifunctional glutamate/proline--tRNA ligase [Mu...   104   7e-21

>gb|ABK95302.1| unknown [Populus trichocarpa]
          Length = 498

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/74 (64%), Positives = 59/74 (79%)
 Frame = +3

Query: 3   QWYSEVVVRSELIEYFDIGGCYILRPSTVSIWEIMKDFFDAEIKKMKVKQCYFPFLLSEA 182
           +WYSEVVV  E+IEY+DI GCYILRP  +SIWEIM+ FFDAEIKKMK+K CYFP  +S +
Sbjct: 27  EWYSEVVVNGEMIEYYDISGCYILRPWAMSIWEIMQVFFDAEIKKMKIKNCYFPLFVSSS 86

Query: 183 ALEWKLNPNKGFAP 224
            LE + +  +GFAP
Sbjct: 87  VLEKEKDHIEGFAP 100


>ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus communis]
           gi|223545660|gb|EEF47164.1| prolyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 501

 Score =  106 bits (264), Expect = 2e-21
 Identities = 46/74 (62%), Positives = 59/74 (79%)
 Frame = +3

Query: 3   QWYSEVVVRSELIEYFDIGGCYILRPSTVSIWEIMKDFFDAEIKKMKVKQCYFPFLLSEA 182
           +WYS+VVV  E+IEY+DI GCYILRP  +SIWE+M+ FFDAEIKKMK+K CYFP  +S +
Sbjct: 30  EWYSDVVVSGEMIEYYDISGCYILRPWAMSIWEVMQTFFDAEIKKMKIKNCYFPLFVSSS 89

Query: 183 ALEWKLNPNKGFAP 224
            LE + +  +GFAP
Sbjct: 90  VLEKEKDHIEGFAP 103


>ref|XP_003554576.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase-like [Glycine
           max]
          Length = 515

 Score =  105 bits (261), Expect = 5e-21
 Identities = 45/74 (60%), Positives = 60/74 (81%)
 Frame = +3

Query: 3   QWYSEVVVRSELIEYFDIGGCYILRPSTVSIWEIMKDFFDAEIKKMKVKQCYFPFLLSEA 182
           +WYSEVVV +E+IEY+DI GCYILRP +++IWEIM++FFD EIKKMK+K CYFP  +S  
Sbjct: 44  EWYSEVVVNAEMIEYYDISGCYILRPWSMAIWEIMQEFFDPEIKKMKIKNCYFPLFVSPG 103

Query: 183 ALEWKLNPNKGFAP 224
            L+ + +  +GFAP
Sbjct: 104 VLQKEKDHVEGFAP 117


>ref|XP_003521619.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase-like [Glycine
           max]
          Length = 515

 Score =  105 bits (261), Expect = 5e-21
 Identities = 45/74 (60%), Positives = 60/74 (81%)
 Frame = +3

Query: 3   QWYSEVVVRSELIEYFDIGGCYILRPSTVSIWEIMKDFFDAEIKKMKVKQCYFPFLLSEA 182
           +WYSEVVV +E+IEY+DI GCYILRP +++IWEIM++FFD EIKKMK+K CYFP  +S  
Sbjct: 44  EWYSEVVVNAEMIEYYDISGCYILRPWSMAIWEIMQEFFDPEIKKMKIKNCYFPLFVSPG 103

Query: 183 ALEWKLNPNKGFAP 224
            L+ + +  +GFAP
Sbjct: 104 VLQKEKDHVEGFAP 117


>ref|NP_084011.1| bifunctional glutamate/proline--tRNA ligase [Mus musculus]
            gi|341942279|sp|Q8CGC7.4|SYEP_MOUSE RecName:
            Full=Bifunctional glutamate/proline--tRNA ligase;
            AltName: Full=Bifunctional aminoacyl-tRNA synthetase;
            Includes: RecName: Full=Glutamate--tRNA ligase; AltName:
            Full=Glutamyl-tRNA synthetase; Short=GluRS; Includes:
            RecName: Full=Proline--tRNA ligase; AltName:
            Full=Prolyl-tRNA synthetase; Short=ProRS
          Length = 1512

 Score =  104 bits (260), Expect = 7e-21
 Identities = 45/74 (60%), Positives = 60/74 (81%)
 Frame = +3

Query: 3    QWYSEVVVRSELIEYFDIGGCYILRPSTVSIWEIMKDFFDAEIKKMKVKQCYFPFLLSEA 182
            +WYS+V+ +SE+IEY+D+ GCYILRP + SIWE +KDFFDAEIKK+ V+ CYFP  +S+A
Sbjct: 1026 EWYSQVITKSEMIEYYDVSGCYILRPWSYSIWESIKDFFDAEIKKLGVENCYFPIFVSQA 1085

Query: 183  ALEWKLNPNKGFAP 224
            ALE + N  + FAP
Sbjct: 1086 ALEKEKNHIEDFAP 1099


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