BLASTX nr result
ID: Coptis21_contig00037922
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00037922 (263 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFU25705.1| gag-pol precursor [Castanea mollissima] 75 6e-12 gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata] 71 1e-10 emb|CAN64726.1| hypothetical protein VITISV_003447 [Vitis vinifera] 71 1e-10 emb|CAN74304.1| hypothetical protein VITISV_013003 [Vitis vinifera] 70 1e-10 emb|CCI55289.1| PH01B001G05.12 [Phyllostachys edulis] 69 3e-10 >gb|AFU25705.1| gag-pol precursor [Castanea mollissima] Length = 1106 Score = 75.1 bits (183), Expect = 6e-12 Identities = 36/73 (49%), Positives = 47/73 (64%) Frame = -1 Query: 263 GAWAEELNQVLWAYRMTPRTTIGETPFAMAYGIEAVIPSEMVAATRRAEAVEGGSNWRIL 84 G W EEL VLWAYR TPR + GETPF+M YG+EAVIP E+ T + + +N +L Sbjct: 944 GRWVEELPHVLWAYRTTPRRSTGETPFSMTYGMEAVIPLELGFPTLKFDQYNNVTNHDML 1003 Query: 83 AADMNLAEERRDL 45 +N EERR++ Sbjct: 1004 HDSLNTIEERREV 1016 >gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata] Length = 1103 Score = 70.9 bits (172), Expect = 1e-10 Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 2/74 (2%) Frame = -1 Query: 263 GAWAEELNQVLWAYRMTPRTTIGETPFAMAYGIEAVIPSEM-VAATRRAEA-VEGGSNWR 90 G W EEL VLWAYR TPR GETPF++ YG+EAV+P+E+ V RR EA + N Sbjct: 939 GGWYEELQPVLWAYRTTPRRPTGETPFSLVYGMEAVVPAELNVPGLRRTEAPLNEEENSA 998 Query: 89 ILAADMNLAEERRD 48 +L ++ ERRD Sbjct: 999 MLNDSLDTINERRD 1012 >emb|CAN64726.1| hypothetical protein VITISV_003447 [Vitis vinifera] Length = 819 Score = 70.9 bits (172), Expect = 1e-10 Identities = 35/72 (48%), Positives = 47/72 (65%) Frame = -1 Query: 263 GAWAEELNQVLWAYRMTPRTTIGETPFAMAYGIEAVIPSEMVAATRRAEAVEGGSNWRIL 84 G W EEL VLWAYR+TP IG TPFA+AYGI+AVIP+E+ T R +A + L Sbjct: 709 GKWVEELPGVLWAYRITPERPIGNTPFALAYGIDAVIPTEIGLPTIRTDATKQNDANTEL 768 Query: 83 AADMNLAEERRD 48 +++ A+E R+ Sbjct: 769 GRNLDWADEVRE 780 >emb|CAN74304.1| hypothetical protein VITISV_013003 [Vitis vinifera] Length = 894 Score = 70.5 bits (171), Expect = 1e-10 Identities = 35/72 (48%), Positives = 46/72 (63%) Frame = -1 Query: 263 GAWAEELNQVLWAYRMTPRTTIGETPFAMAYGIEAVIPSEMVAATRRAEAVEGGSNWRIL 84 G W EEL VLWAYR TP G TPFA+AYG+ AVIP+E+ T R EAV+ +L Sbjct: 802 GKWVEELPGVLWAYRTTPGRPTGNTPFALAYGMNAVIPTEIGLPTIRTEAVKQDDASTVL 861 Query: 83 AADMNLAEERRD 48 +++ A+E R+ Sbjct: 862 GRNLDWADEVRE 873 >emb|CCI55289.1| PH01B001G05.12 [Phyllostachys edulis] Length = 1335 Score = 69.3 bits (168), Expect = 3e-10 Identities = 32/72 (44%), Positives = 45/72 (62%) Frame = -1 Query: 263 GAWAEELNQVLWAYRMTPRTTIGETPFAMAYGIEAVIPSEMVAATRRAEAVEGGSNWRIL 84 GAW +EL VLWA RMT GETPF + +G EA++P E+ + R EA + ++ Sbjct: 1200 GAWVQELPSVLWAVRMTASRATGETPFFLVFGAEAMLPPELKIRSTRVEAFHDSNQEQLR 1259 Query: 83 AADMNLAEERRD 48 A D+NL EE+R+ Sbjct: 1260 ADDINLLEEKRN 1271