BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037922
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                 75   6e-12
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]              71   1e-10
emb|CAN64726.1| hypothetical protein VITISV_003447 [Vitis vinifera]    71   1e-10
emb|CAN74304.1| hypothetical protein VITISV_013003 [Vitis vinifera]    70   1e-10
emb|CCI55289.1| PH01B001G05.12 [Phyllostachys edulis]                  69   3e-10

>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/73 (49%), Positives = 47/73 (64%)
 Frame = -1

Query: 263  GAWAEELNQVLWAYRMTPRTTIGETPFAMAYGIEAVIPSEMVAATRRAEAVEGGSNWRIL 84
            G W EEL  VLWAYR TPR + GETPF+M YG+EAVIP E+   T + +     +N  +L
Sbjct: 944  GRWVEELPHVLWAYRTTPRRSTGETPFSMTYGMEAVIPLELGFPTLKFDQYNNVTNHDML 1003

Query: 83   AADMNLAEERRDL 45
               +N  EERR++
Sbjct: 1004 HDSLNTIEERREV 1016


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
 Frame = -1

Query: 263  GAWAEELNQVLWAYRMTPRTTIGETPFAMAYGIEAVIPSEM-VAATRRAEA-VEGGSNWR 90
            G W EEL  VLWAYR TPR   GETPF++ YG+EAV+P+E+ V   RR EA +    N  
Sbjct: 939  GGWYEELQPVLWAYRTTPRRPTGETPFSLVYGMEAVVPAELNVPGLRRTEAPLNEEENSA 998

Query: 89   ILAADMNLAEERRD 48
            +L   ++   ERRD
Sbjct: 999  MLNDSLDTINERRD 1012


>emb|CAN64726.1| hypothetical protein VITISV_003447 [Vitis vinifera]
          Length = 819

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/72 (48%), Positives = 47/72 (65%)
 Frame = -1

Query: 263 GAWAEELNQVLWAYRMTPRTTIGETPFAMAYGIEAVIPSEMVAATRRAEAVEGGSNWRIL 84
           G W EEL  VLWAYR+TP   IG TPFA+AYGI+AVIP+E+   T R +A +       L
Sbjct: 709 GKWVEELPGVLWAYRITPERPIGNTPFALAYGIDAVIPTEIGLPTIRTDATKQNDANTEL 768

Query: 83  AADMNLAEERRD 48
             +++ A+E R+
Sbjct: 769 GRNLDWADEVRE 780


>emb|CAN74304.1| hypothetical protein VITISV_013003 [Vitis vinifera]
          Length = 894

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/72 (48%), Positives = 46/72 (63%)
 Frame = -1

Query: 263  GAWAEELNQVLWAYRMTPRTTIGETPFAMAYGIEAVIPSEMVAATRRAEAVEGGSNWRIL 84
            G W EEL  VLWAYR TP    G TPFA+AYG+ AVIP+E+   T R EAV+      +L
Sbjct: 802  GKWVEELPGVLWAYRTTPGRPTGNTPFALAYGMNAVIPTEIGLPTIRTEAVKQDDASTVL 861

Query: 83   AADMNLAEERRD 48
              +++ A+E R+
Sbjct: 862  GRNLDWADEVRE 873


>emb|CCI55289.1| PH01B001G05.12 [Phyllostachys edulis]
          Length = 1335

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/72 (44%), Positives = 45/72 (62%)
 Frame = -1

Query: 263  GAWAEELNQVLWAYRMTPRTTIGETPFAMAYGIEAVIPSEMVAATRRAEAVEGGSNWRIL 84
            GAW +EL  VLWA RMT     GETPF + +G EA++P E+   + R EA    +  ++ 
Sbjct: 1200 GAWVQELPSVLWAVRMTASRATGETPFFLVFGAEAMLPPELKIRSTRVEAFHDSNQEQLR 1259

Query: 83   AADMNLAEERRD 48
            A D+NL EE+R+
Sbjct: 1260 ADDINLLEEKRN 1271