BLASTX nr result

ID: Coptis21_contig00037910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037910
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621615.1| Protein YIF1B-B [Medicago truncatula] gi|355...   104   7e-21
gb|AFK45302.1| unknown [Medicago truncatula]                          102   3e-20
ref|XP_003555074.1| PREDICTED: protein YIF1B-A-like [Glycine max]     102   3e-20
ref|NP_001242205.1| uncharacterized protein LOC100799056 [Glycin...   102   3e-20
ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis] g...   102   3e-20

>ref|XP_003621615.1| Protein YIF1B-B [Medicago truncatula] gi|355496630|gb|AES77833.1|
           Protein YIF1B-B [Medicago truncatula]
          Length = 382

 Score =  104 bits (260), Expect = 7e-21
 Identities = 46/57 (80%), Positives = 52/57 (91%)
 Frame = -1

Query: 342 YSYYFLMPFMCLCMGVFLVKTMKRILFAEIRSYDSSKQNYALLFMALAQFPFFMWLG 172
           YSYY LMP+ CLCMG+FLVKTMKR+LFAE+RSYDSSK +Y LLF+ALAQFP FMWLG
Sbjct: 318 YSYYVLMPWFCLCMGIFLVKTMKRVLFAEVRSYDSSKHHYLLLFIALAQFPLFMWLG 374


>gb|AFK45302.1| unknown [Medicago truncatula]
          Length = 273

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/57 (78%), Positives = 52/57 (91%)
 Frame = -1

Query: 342 YSYYFLMPFMCLCMGVFLVKTMKRILFAEIRSYDSSKQNYALLFMALAQFPFFMWLG 172
           YS+Y LMP+ CLCMG+FLVKTMKR+LFAE+RSYDSSK +Y LLF+ALAQFP FMWLG
Sbjct: 209 YSHYALMPWFCLCMGIFLVKTMKRVLFAEVRSYDSSKHHYLLLFIALAQFPLFMWLG 265


>ref|XP_003555074.1| PREDICTED: protein YIF1B-A-like [Glycine max]
          Length = 269

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/57 (78%), Positives = 51/57 (89%)
 Frame = -1

Query: 342 YSYYFLMPFMCLCMGVFLVKTMKRILFAEIRSYDSSKQNYALLFMALAQFPFFMWLG 172
           YSYYFLMP+ CLCMGVFLVKTMKR+LFAE+RSYDSS+ +Y LLF+AL QFP F WLG
Sbjct: 205 YSYYFLMPWTCLCMGVFLVKTMKRVLFAEVRSYDSSRHHYLLLFIALVQFPLFTWLG 261


>ref|NP_001242205.1| uncharacterized protein LOC100799056 [Glycine max]
           gi|255641178|gb|ACU20866.1| unknown [Glycine max]
          Length = 269

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/57 (78%), Positives = 51/57 (89%)
 Frame = -1

Query: 342 YSYYFLMPFMCLCMGVFLVKTMKRILFAEIRSYDSSKQNYALLFMALAQFPFFMWLG 172
           YSYYFLMP+ CLCMGVFLVKTMKR+LFAE+RSYDSS+ +Y LLF+AL QFP F WLG
Sbjct: 205 YSYYFLMPWTCLCMGVFLVKTMKRVLFAEVRSYDSSRHHYLLLFIALVQFPLFTWLG 261


>ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis]
           gi|223525796|gb|EEF28242.1| Protein YIF1A, putative
           [Ricinus communis]
          Length = 269

 Score =  102 bits (254), Expect = 3e-20
 Identities = 44/57 (77%), Positives = 52/57 (91%)
 Frame = -1

Query: 342 YSYYFLMPFMCLCMGVFLVKTMKRILFAEIRSYDSSKQNYALLFMALAQFPFFMWLG 172
           YSYYFLMP+ CLCMG+FLVKTMKR+LFAE+R+YDSS+ +Y LLF+ALAQFP F WLG
Sbjct: 205 YSYYFLMPWACLCMGIFLVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLG 261


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