BLASTX nr result

ID: Coptis21_contig00037906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037906
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609893.1| hypothetical protein MTR_4g124120 [Medicago ...    58   7e-07
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    58   9e-07
ref|XP_003635054.1| PREDICTED: cysteine desulfurase 1, mitochond...    55   8e-06

>ref|XP_003609893.1| hypothetical protein MTR_4g124120 [Medicago truncatula]
           gi|355510948|gb|AES92090.1| hypothetical protein
           MTR_4g124120 [Medicago truncatula]
          Length = 280

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
 Frame = +2

Query: 17  MDLECGAEFKRPVARVRVRLDIKERLLKGVDLRTEMGEIIPVTFKYEKLDIFCYFCGCIG 196
           M  + G  F R   R++VR DI++ L  G  ++   GE   V FKYEKL  FC+ CG +G
Sbjct: 50  MKEKVGMGFWREYMRLKVRFDIRQPLKIGKKIKANEGEWCVVNFKYEKLGTFCFVCGVLG 109

Query: 197 HDLHYCKRR----EQFCMDLRKLGGSPKD 271
           H  + C+ R          LR+ GGS  D
Sbjct: 110 HSENKCEVRYSQGRASSQWLREDGGSKAD 138


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = +2

Query: 2   GKVKAMDLECGAEFKRPVARVRVRLDIKERLLKGVDLRTEMGEIIPVTFKYEKLDIFCYF 181
           GK    D+   A   R   R+RV LD+++ L +   +R   GE   V FKYE+L  FCY 
Sbjct: 97  GKFVDYDINNNAGLWRNFMRIRVLLDVRQPLKRWKKIRKPQGEWSLVHFKYERLSTFCYL 156

Query: 182 CGCIGHDLHYCKR 220
           CG +GH   +C +
Sbjct: 157 CGMLGHSEKFCDK 169


>ref|XP_003635054.1| PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera]
          Length = 865

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/73 (36%), Positives = 38/73 (52%)
 Frame = +2

Query: 2   GKVKAMDLECGAEFKRPVARVRVRLDIKERLLKGVDLRTEMGEIIPVTFKYEKLDIFCYF 181
           GK    ++   A   R   R+RV LD+++ L     +R   GE   V FKYE+L  FCY 
Sbjct: 604 GKFVDYNINNNAGLWRNFMRIRVLLDVRQPLKMWKRIRKPQGEWSLVHFKYERLSTFCYL 663

Query: 182 CGCIGHDLHYCKR 220
           CG +GH   +C +
Sbjct: 664 CGMLGHSEKFCNK 676


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