BLASTX nr result

ID: Coptis21_contig00037877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037877
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533351.1| conserved hypothetical protein [Ricinus comm...   184   1e-44
emb|CBI24760.3| unnamed protein product [Vitis vinifera]              181   7e-44
emb|CAN75811.1| hypothetical protein VITISV_004632 [Vitis vinifera]   181   7e-44
ref|XP_002310377.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38

>ref|XP_002533351.1| conserved hypothetical protein [Ricinus communis]
           gi|223526816|gb|EEF29036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 226

 Score =  184 bits (466), Expect = 1e-44
 Identities = 85/116 (73%), Positives = 94/116 (81%), Gaps = 3/116 (2%)
 Frame = -2

Query: 532 WHRFSNYMDKCSEGQSYLSVDQHGIVAXXXXXXXXXLAQADWKSYNPPKNLNHREFRFWV 353
           +HRF NYMDKCS+G SYL+VD+HG V+         LA+ADWKS NPPK LNHREFRFWV
Sbjct: 111 YHRFRNYMDKCSKGGSYLTVDKHGKVSLRSLGSLESLAEADWKSVNPPKKLNHREFRFWV 170

Query: 352 SRSTGKCLTVFGGKTKK---QVGVSDCKFKGSNPYQLFAFRFHYHKAFCCCGRYNE 194
           S STGKCLTVFGGKTKK    VGV++CKF GSNP+QLFAFRFHYHKAFCCCG  NE
Sbjct: 171 SHSTGKCLTVFGGKTKKDKRSVGVAECKFDGSNPFQLFAFRFHYHKAFCCCGLSNE 226


>emb|CBI24760.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  181 bits (459), Expect = 7e-44
 Identities = 84/113 (74%), Positives = 91/113 (80%), Gaps = 1/113 (0%)
 Frame = -2

Query: 529 HRFSNYMDKCSEGQSYLSVDQHGIVAXXXXXXXXXLAQADWKSYNPPKNLNHREFRFWVS 350
           HRFSNYMDKCS GQSYL+ D+HG V+         LA+ADWKS NPPK LNHRE RFWV 
Sbjct: 105 HRFSNYMDKCSGGQSYLTADKHGKVSLRSLSSLKSLAEADWKSINPPKELNHRELRFWVH 164

Query: 349 RSTGKCLTVFGGKTKKQ-VGVSDCKFKGSNPYQLFAFRFHYHKAFCCCGRYNE 194
             TGKCLTVFGGKTKK+ VGV+ CKF GSNPYQLFAFRFHYHKAFCCCG +NE
Sbjct: 165 LGTGKCLTVFGGKTKKRTVGVAKCKFDGSNPYQLFAFRFHYHKAFCCCGVHNE 217


>emb|CAN75811.1| hypothetical protein VITISV_004632 [Vitis vinifera]
          Length = 231

 Score =  181 bits (459), Expect = 7e-44
 Identities = 84/113 (74%), Positives = 91/113 (80%), Gaps = 1/113 (0%)
 Frame = -2

Query: 529 HRFSNYMDKCSEGQSYLSVDQHGIVAXXXXXXXXXLAQADWKSYNPPKNLNHREFRFWVS 350
           HRFSNYMDKCS GQSYL+ D+HG V+         LA+ADWKS NPPK LNHRE RFWV 
Sbjct: 119 HRFSNYMDKCSGGQSYLTADKHGKVSLRSLSSLKSLAEADWKSINPPKELNHRELRFWVH 178

Query: 349 RSTGKCLTVFGGKTKKQ-VGVSDCKFKGSNPYQLFAFRFHYHKAFCCCGRYNE 194
             TGKCLTVFGGKTKK+ VGV+ CKF GSNPYQLFAFRFHYHKAFCCCG +NE
Sbjct: 179 LGTGKCLTVFGGKTKKRTVGVAKCKFDGSNPYQLFAFRFHYHKAFCCCGVHNE 231


>ref|XP_002310377.1| predicted protein [Populus trichocarpa] gi|222853280|gb|EEE90827.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  162 bits (411), Expect = 3e-38
 Identities = 77/114 (67%), Positives = 87/114 (76%), Gaps = 1/114 (0%)
 Frame = -2

Query: 532 WHRFSNYMDKCSEGQSYLSVDQHGIVAXXXXXXXXXLAQADWKSYNPPKNLNHREFRFWV 353
           +HRF NYMD+CS GQSYL+VD+ G V+         L +ADWKS NPPK LNHREFRFWV
Sbjct: 103 FHRFRNYMDRCSGGQSYLTVDKKGKVSLRSLKSLQSLGEADWKSINPPKRLNHREFRFWV 162

Query: 352 SRSTGKCLTVF-GGKTKKQVGVSDCKFKGSNPYQLFAFRFHYHKAFCCCGRYNE 194
           +R TGKCLTVF   K K+ VGVS+CK  GSN YQLFAFRFHYHKAFC CG +NE
Sbjct: 163 NRITGKCLTVFEEKKDKRTVGVSECKLDGSNTYQLFAFRFHYHKAFCSCGVHNE 216


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