BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037872
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511067.1| pentatricopeptide repeat-containing protein,...   102   3e-20
emb|CBI15771.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17
ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group] g...    81   1e-13
gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japo...    81   1e-13

>ref|XP_002511067.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550182|gb|EEF51669.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 318

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/82 (54%), Positives = 59/82 (71%)
 Frame = +2

Query: 8   LFREMLVEGXXXXXXXXXXXXXXCGHLGALDQGQWIHTYCERNGIQMSLAVSNAFIDMYT 187
           LFRE+ + G              CGH+GAL QG+W+HTYCERNGI M+L+V NA IDMY+
Sbjct: 133 LFRELQIAGVIADAALVACVVSACGHMGALAQGRWVHTYCERNGIDMNLSVRNALIDMYS 192

Query: 188 RCGDVVKAVEIFNELVEKDVFS 253
           +CGD+ KA +IFN +V+KD+FS
Sbjct: 193 KCGDIEKAHQIFNGMVKKDLFS 214


>emb|CBI15771.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/84 (51%), Positives = 53/84 (63%)
 Frame = +2

Query: 2   IGLFREMLVEGXXXXXXXXXXXXXXCGHLGALDQGQWIHTYCERNGIQMSLAVSNAFIDM 181
           I LFREM + G              CGH GAL QG+WIH YCERN I+M L   NA I M
Sbjct: 129 IELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGM 188

Query: 182 YTRCGDVVKAVEIFNELVEKDVFS 253
           Y++CGD+ KA+EIF+ L + D+FS
Sbjct: 189 YSKCGDIQKALEIFHGLTQPDIFS 212


>ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 624

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/84 (51%), Positives = 53/84 (63%)
 Frame = +2

Query: 2   IGLFREMLVEGXXXXXXXXXXXXXXCGHLGALDQGQWIHTYCERNGIQMSLAVSNAFIDM 181
           I LFREM + G              CGH GAL QG+WIH YCERN I+M L   NA I M
Sbjct: 317 IELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGM 376

Query: 182 YTRCGDVVKAVEIFNELVEKDVFS 253
           Y++CGD+ KA+EIF+ L + D+FS
Sbjct: 377 YSKCGDIQKALEIFHGLTQPDIFS 400


>ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
           gi|50725675|dbj|BAD33141.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza
           sativa Japonica Group] gi|215697775|dbj|BAG91968.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 581

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/84 (41%), Positives = 54/84 (64%)
 Frame = +2

Query: 2   IGLFREMLVEGXXXXXXXXXXXXXXCGHLGALDQGQWIHTYCERNGIQMSLAVSNAFIDM 181
           + LFR+M + G              CG +GALD G+++H YC+ +G+   L+V N+ IDM
Sbjct: 282 VDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDM 341

Query: 182 YTRCGDVVKAVEIFNELVEKDVFS 253
           Y++CGDV KA +IF+ L ++DVF+
Sbjct: 342 YSKCGDVNKAYQIFHGLTKRDVFT 365


>gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
          Length = 493

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/84 (41%), Positives = 54/84 (64%)
 Frame = +2

Query: 2   IGLFREMLVEGXXXXXXXXXXXXXXCGHLGALDQGQWIHTYCERNGIQMSLAVSNAFIDM 181
           + LFR+M + G              CG +GALD G+++H YC+ +G+   L+V N+ IDM
Sbjct: 194 VDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDM 253

Query: 182 YTRCGDVVKAVEIFNELVEKDVFS 253
           Y++CGDV KA +IF+ L ++DVF+
Sbjct: 254 YSKCGDVNKAYQIFHGLTKRDVFT 277