BLASTX nr result
ID: Coptis21_contig00037872
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00037872 (255 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002511067.1| pentatricopeptide repeat-containing protein,... 102 3e-20 emb|CBI15771.3| unnamed protein product [Vitis vinifera] 92 4e-17 ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containi... 92 4e-17 ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group] g... 81 1e-13 gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japo... 81 1e-13 >ref|XP_002511067.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223550182|gb|EEF51669.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 318 Score = 102 bits (254), Expect = 3e-20 Identities = 45/82 (54%), Positives = 59/82 (71%) Frame = +2 Query: 8 LFREMLVEGXXXXXXXXXXXXXXCGHLGALDQGQWIHTYCERNGIQMSLAVSNAFIDMYT 187 LFRE+ + G CGH+GAL QG+W+HTYCERNGI M+L+V NA IDMY+ Sbjct: 133 LFRELQIAGVIADAALVACVVSACGHMGALAQGRWVHTYCERNGIDMNLSVRNALIDMYS 192 Query: 188 RCGDVVKAVEIFNELVEKDVFS 253 +CGD+ KA +IFN +V+KD+FS Sbjct: 193 KCGDIEKAHQIFNGMVKKDLFS 214 >emb|CBI15771.3| unnamed protein product [Vitis vinifera] Length = 436 Score = 92.0 bits (227), Expect = 4e-17 Identities = 43/84 (51%), Positives = 53/84 (63%) Frame = +2 Query: 2 IGLFREMLVEGXXXXXXXXXXXXXXCGHLGALDQGQWIHTYCERNGIQMSLAVSNAFIDM 181 I LFREM + G CGH GAL QG+WIH YCERN I+M L NA I M Sbjct: 129 IELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGM 188 Query: 182 YTRCGDVVKAVEIFNELVEKDVFS 253 Y++CGD+ KA+EIF+ L + D+FS Sbjct: 189 YSKCGDIQKALEIFHGLTQPDIFS 212 >ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Vitis vinifera] Length = 624 Score = 92.0 bits (227), Expect = 4e-17 Identities = 43/84 (51%), Positives = 53/84 (63%) Frame = +2 Query: 2 IGLFREMLVEGXXXXXXXXXXXXXXCGHLGALDQGQWIHTYCERNGIQMSLAVSNAFIDM 181 I LFREM + G CGH GAL QG+WIH YCERN I+M L NA I M Sbjct: 317 IELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGM 376 Query: 182 YTRCGDVVKAVEIFNELVEKDVFS 253 Y++CGD+ KA+EIF+ L + D+FS Sbjct: 377 YSKCGDIQKALEIFHGLTQPDIFS 400 >ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group] gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group] gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group] Length = 581 Score = 80.9 bits (198), Expect = 1e-13 Identities = 35/84 (41%), Positives = 54/84 (64%) Frame = +2 Query: 2 IGLFREMLVEGXXXXXXXXXXXXXXCGHLGALDQGQWIHTYCERNGIQMSLAVSNAFIDM 181 + LFR+M + G CG +GALD G+++H YC+ +G+ L+V N+ IDM Sbjct: 282 VDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDM 341 Query: 182 YTRCGDVVKAVEIFNELVEKDVFS 253 Y++CGDV KA +IF+ L ++DVF+ Sbjct: 342 YSKCGDVNKAYQIFHGLTKRDVFT 365 >gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group] Length = 493 Score = 80.9 bits (198), Expect = 1e-13 Identities = 35/84 (41%), Positives = 54/84 (64%) Frame = +2 Query: 2 IGLFREMLVEGXXXXXXXXXXXXXXCGHLGALDQGQWIHTYCERNGIQMSLAVSNAFIDM 181 + LFR+M + G CG +GALD G+++H YC+ +G+ L+V N+ IDM Sbjct: 194 VDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDM 253 Query: 182 YTRCGDVVKAVEIFNELVEKDVFS 253 Y++CGDV KA +IF+ L ++DVF+ Sbjct: 254 YSKCGDVNKAYQIFHGLTKRDVFT 277