BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037868
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24321.1| unknown [Picea sitchensis]                             135   5e-30
ref|XP_004136383.1| PREDICTED: AP-2 complex subunit sigma-like [...   135   8e-30
emb|CBI19859.3| unnamed protein product [Vitis vinifera]              135   8e-30
ref|XP_002268045.1| PREDICTED: AP-2 complex subunit sigma-like [...   134   1e-29
ref|NP_175219.1| AP-2 complex subunit sigma [Arabidopsis thalian...   134   1e-29

>gb|ABK24321.1| unknown [Picea sitchensis]
          Length = 142

 Score =  135 bits (341), Expect = 5e-30
 Identities = 70/94 (74%), Positives = 79/94 (84%), Gaps = 2/94 (2%)
 Frame = -1

Query: 299 MIRFILLQNRQGKTRLAKYYVPFEEFEKHKVEYEVHRLVVNRDPKFTNFLEFRTYKIIYR 120
           MIRFILLQNRQGKTRLAKYY+P EE EKHK+EYEVHRLVVNRDPKFTNF+EFRT+K+IYR
Sbjct: 1   MIRFILLQNRQGKTRLAKYYIPLEESEKHKLEYEVHRLVVNRDPKFTNFVEFRTHKVIYR 60

Query: 119 RYAGL-FSPCVLTSQI*VSVLESIICLVN-MDHF 24
           RYAGL FS CV  +   ++ LESI   V  +DHF
Sbjct: 61  RYAGLFFSMCVDITDNELAYLESIHLFVEILDHF 94


>ref|XP_004136383.1| PREDICTED: AP-2 complex subunit sigma-like [Cucumis sativus]
           gi|449505752|ref|XP_004162559.1| PREDICTED: AP-2 complex
           subunit sigma-like [Cucumis sativus]
          Length = 142

 Score =  135 bits (339), Expect = 8e-30
 Identities = 71/94 (75%), Positives = 78/94 (82%), Gaps = 2/94 (2%)
 Frame = -1

Query: 299 MIRFILLQNRQGKTRLAKYYVPFEEFEKHKVEYEVHRLVVNRDPKFTNFLEFRTYKIIYR 120
           MIRFILLQNRQGKTRLAKYYVP EE EKHKVEYEVHRLVVNRDPKFTNF+EFRT+K+IYR
Sbjct: 1   MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYR 60

Query: 119 RYAGL-FSPCVLTSQI*VSVLESIICLVN-MDHF 24
           RYAGL FS CV  +   ++ LE I   V  +DHF
Sbjct: 61  RYAGLFFSLCVDITDNELAYLECIHLFVEILDHF 94


>emb|CBI19859.3| unnamed protein product [Vitis vinifera]
          Length = 188

 Score =  135 bits (339), Expect = 8e-30
 Identities = 70/95 (73%), Positives = 79/95 (83%), Gaps = 2/95 (2%)
 Frame = -1

Query: 302 KMIRFILLQNRQGKTRLAKYYVPFEEFEKHKVEYEVHRLVVNRDPKFTNFLEFRTYKIIY 123
           +MIRFI+LQNRQGKTRLAKYYVP EE EKHKVEYEVHRLVVNRDPKFTNF+EFRT+K+IY
Sbjct: 46  RMIRFIILQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIY 105

Query: 122 RRYAGL-FSPCVLTSQI*VSVLESIICLVN-MDHF 24
           RRYAGL FS CV  +   ++ LE I   V  +DHF
Sbjct: 106 RRYAGLFFSLCVDMTDNELAYLECIHLFVEILDHF 140


>ref|XP_002268045.1| PREDICTED: AP-2 complex subunit sigma-like [Vitis vinifera]
          Length = 142

 Score =  134 bits (338), Expect = 1e-29
 Identities = 71/94 (75%), Positives = 78/94 (82%), Gaps = 2/94 (2%)
 Frame = -1

Query: 299 MIRFILLQNRQGKTRLAKYYVPFEEFEKHKVEYEVHRLVVNRDPKFTNFLEFRTYKIIYR 120
           MIRFILLQNRQGKTRLAKYYVPFEE EKHKVEYEVHRLVVNRDPK TNF+EFRT+K+IYR
Sbjct: 1   MIRFILLQNRQGKTRLAKYYVPFEESEKHKVEYEVHRLVVNRDPKHTNFVEFRTHKVIYR 60

Query: 119 RYAGL-FSPCVLTSQI*VSVLESIICLVN-MDHF 24
           RYAGL FS CV  +   ++ LE I   V  +DHF
Sbjct: 61  RYAGLFFSLCVDITDNELAYLECIHLFVEILDHF 94


>ref|NP_175219.1| AP-2 complex subunit sigma [Arabidopsis thaliana]
           gi|297852382|ref|XP_002894072.1| hypothetical protein
           ARALYDRAFT_891585 [Arabidopsis lyrata subsp. lyrata]
           gi|75148767|sp|Q84WL9.1|AP2S_ARATH RecName: Full=AP-2
           complex subunit sigma; AltName: Full=Adapter-related
           protein complex 2 sigma subunit; AltName: Full=Adaptor
           AP-2 17 kDa protein; AltName: Full=Clathrin assembly
           protein 2 small chain; AltName: Full=Clathrin coat
           assembly protein AP17; AltName: Full=Clathrin
           coat-associated protein AP17; AltName:
           Full=Sigma2-adaptin gi|27764984|gb|AAO23613.1| At1g47830
           [Arabidopsis thaliana] gi|110742867|dbj|BAE99331.1|
           putative clathrin coat assembly protein AP17
           [Arabidopsis thaliana] gi|297339914|gb|EFH70331.1|
           hypothetical protein ARALYDRAFT_891585 [Arabidopsis
           lyrata subsp. lyrata] gi|332194099|gb|AEE32220.1| AP-2
           complex subunit sigma [Arabidopsis thaliana]
          Length = 142

 Score =  134 bits (337), Expect = 1e-29
 Identities = 71/94 (75%), Positives = 78/94 (82%), Gaps = 2/94 (2%)
 Frame = -1

Query: 299 MIRFILLQNRQGKTRLAKYYVPFEEFEKHKVEYEVHRLVVNRDPKFTNFLEFRTYKIIYR 120
           MIRFILLQNRQGKTRLAKYYVP EE EKHKVEYEVHRLVVNRD KFTNF+EFRT+K+IYR
Sbjct: 1   MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDAKFTNFVEFRTHKVIYR 60

Query: 119 RYAGL-FSPCVLTSQI*VSVLESIICLVN-MDHF 24
           RYAGL FS CV  +   ++ LESI   V  +DHF
Sbjct: 61  RYAGLFFSVCVDITDNELAYLESIHLFVEILDHF 94