BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037865
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518629.1| hypothetical protein RCOM_1307020 [Ricinus c...    65   6e-09
ref|XP_003537529.1| PREDICTED: 30S ribosomal protein S1 homolog ...    57   2e-06
ref|XP_002264430.1| PREDICTED: 30S ribosomal protein S1 homolog ...    56   3e-06
emb|CAN68483.1| hypothetical protein VITISV_006784 [Vitis vinifera]    56   3e-06
gb|AFK42776.1| unknown [Medicago truncatula]                           55   6e-06

>ref|XP_002518629.1| hypothetical protein RCOM_1307020 [Ricinus communis]
           gi|223542228|gb|EEF43771.1| hypothetical protein
           RCOM_1307020 [Ricinus communis]
          Length = 365

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
 Frame = +1

Query: 79  AAVGSVTNLSFLTTNDAYSINHPFFTTTSSC-LLRKTYLQQRLQCNTRVSVSGNIETEGQ 255
           A+V + + LS L T++  S+ H   T  SSC L  K+  +  +    RVSVS N      
Sbjct: 9   ASVSAHSLLSQLFTSNDASLTHTLSTHFSSCKLFHKS--RHSISAAARVSVSENS----- 61

Query: 256 VDEQPQGVGIGEDAPETTDSSRQSRRYADWKAARAYKESGAIYEGRI 396
            ++     G  ED+P   D+ RQ+RR ADWKAARAY++SG+I+EGRI
Sbjct: 62  -NDSATTTGFLEDSP---DAIRQTRRSADWKAARAYRDSGSIFEGRI 104


>ref|XP_003537529.1| PREDICTED: 30S ribosomal protein S1 homolog [Glycine max]
          Length = 383

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
 Frame = +1

Query: 76  SAAVGSVTNLSFLTTNDAYSINH--PFFTTTSSCLLRKTYLQQRLQCNTRVSVSGNIETE 249
           SA++GS T++SFL+T+ + S +H  PF  T  +    + +    L     VS SGN +  
Sbjct: 5   SASLGSFTSISFLSTSQSQSQSHLSPFKLTVKTPWQWQHH--HYLTSKVLVSASGNTQIP 62

Query: 250 G-QVDEQPQGVGIGEDAPETTDSSRQSRRYADWKAARAYKESGAIYEGRI 396
             ++ ++P         P+  D  RQ+RR +DWKAA+ Y++S  IY GR+
Sbjct: 63  NTELLQRPT-------PPDPLDDVRQARRSSDWKAAKTYQDSKLIYNGRV 105


>ref|XP_002264430.1| PREDICTED: 30S ribosomal protein S1 homolog [Vitis vinifera]
           gi|296089601|emb|CBI39420.3| unnamed protein product
           [Vitis vinifera]
          Length = 390

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
 Frame = +1

Query: 76  SAAVGSVTNLSFLTT----NDAYSINHPFFTTTSSCLLRKTYLQQRLQCNTRVSVSGNIE 243
           S A GSVT LS L+     + + + N       +   +   Y +  L+ +     +  + 
Sbjct: 4   SGASGSVTGLSILSKLFCWDSSSNTNSSASLLINPSKISSFYRRSPLRRSPFHIATARVS 63

Query: 244 TEGQVDEQPQGVGIGEDAPETTDSSRQSRRYADWKAARAYKESGAIYEGRI 396
           TEG   EQ     +    P   D+ RQ+RR ADWKAARA+ ESG IYEGRI
Sbjct: 64  TEGS--EQATAGVVEGSPPPPFDAIRQARRSADWKAARAHLESGFIYEGRI 112


>emb|CAN68483.1| hypothetical protein VITISV_006784 [Vitis vinifera]
          Length = 418

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
 Frame = +1

Query: 76  SAAVGSVTNLSFLTT----NDAYSINHPFFTTTSSCLLRKTYLQQRLQCNTRVSVSGNIE 243
           S A GSVT LS L+     + + + N       +   +   Y +  L+ +     +  + 
Sbjct: 4   SGASGSVTGLSILSKLFCWDSSSNTNSSASLLINPSKISSFYRRSPLRRSPFHIATARVS 63

Query: 244 TEGQVDEQPQGVGIGEDAPETTDSSRQSRRYADWKAARAYKESGAIYEGRI 396
           TEG   EQ     +    P   D+ RQ+RR ADWKAARA+ ESG IYEGRI
Sbjct: 64  TEGS--EQATAGVVEGSPPPPFDAIRQARRSADWKAARAHLESGFIYEGRI 112


>gb|AFK42776.1| unknown [Medicago truncatula]
          Length = 399

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 14/121 (11%)
 Frame = +1

Query: 76  SAAVGSVTNLSFLTTNDAY-------SINHPF------FTTTSSCLLRKTYLQQRLQCNT 216
           SA +GS   +SFL+++ +        SI +PF            C     Y       N 
Sbjct: 5   SATLGSFGAISFLSSSQSQQHDPSSSSIVNPFNFPKCPHKLPPPCQWHPHYRHH----NP 60

Query: 217 RVSVSGNIETEG-QVDEQPQGVGIGEDAPETTDSSRQSRRYADWKAARAYKESGAIYEGR 393
           ++ VS +  +    +DE   G+     AP++ D+ RQ+RR +DWKAA AY++SG IY GR
Sbjct: 61  KIMVSSSSSSNNTHIDEFDSGLLQRPSAPDSYDALRQARRSSDWKAANAYRDSGLIYNGR 120

Query: 394 I 396
           +
Sbjct: 121 V 121