BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037853
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001147118.1| replication protein A1 [Zea mays] gi|1956074...   112   3e-23
gb|ACG44315.1| replication protein A 70 kDa DNA-binding subunit ...   111   5e-23
gb|ACN25531.1| unknown [Zea mays] gi|414865518|tpg|DAA44075.1| T...   110   1e-22
ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [S...   109   2e-22
ref|NP_001141474.1| uncharacterized protein LOC100273584 [Zea ma...   109   3e-22

>ref|NP_001147118.1| replication protein A1 [Zea mays] gi|195607412|gb|ACG25536.1|
           replication protein A 70 kDa DNA-binding subunit [Zea
           mays]
          Length = 618

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/72 (75%), Positives = 62/72 (86%)
 Frame = +2

Query: 5   DPSGGAYVSVFNEQAEKIIGCSADELDKMKKGGDETSYLLKLKEATWAPHVFCVVVTQTE 184
           DP+G A+VSVFNE AEKIIGCSADELD+++K   + SY+LKLKEATW PH+F V VTQ E
Sbjct: 523 DPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHE 582

Query: 185 YNNEKRQRITVR 220
           YNNEKRQRITVR
Sbjct: 583 YNNEKRQRITVR 594


>gb|ACG44315.1| replication protein A 70 kDa DNA-binding subunit [Zea mays]
          Length = 618

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/72 (75%), Positives = 61/72 (84%)
 Frame = +2

Query: 5   DPSGGAYVSVFNEQAEKIIGCSADELDKMKKGGDETSYLLKLKEATWAPHVFCVVVTQTE 184
           DP+G A+VSVFNE AEKIIGCSADELD+++K   + SY LKLKEATW PH+F V VTQ E
Sbjct: 523 DPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHE 582

Query: 185 YNNEKRQRITVR 220
           YNNEKRQRITVR
Sbjct: 583 YNNEKRQRITVR 594


>gb|ACN25531.1| unknown [Zea mays] gi|414865518|tpg|DAA44075.1| TPA: replication
           protein A DNA-binding subunit [Zea mays]
          Length = 617

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/72 (73%), Positives = 61/72 (84%)
 Frame = +2

Query: 5   DPSGGAYVSVFNEQAEKIIGCSADELDKMKKGGDETSYLLKLKEATWAPHVFCVVVTQTE 184
           DP+G A+ SVFNE AEKIIGCSADELD+++K   + SY+LKLKEATW PH+F V VTQ E
Sbjct: 523 DPTGEAWFSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHE 582

Query: 185 YNNEKRQRITVR 220
           YNNEKRQRITVR
Sbjct: 583 YNNEKRQRITVR 594


>ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [Sorghum bicolor]
           gi|241922132|gb|EER95276.1| hypothetical protein
           SORBIDRAFT_01g042890 [Sorghum bicolor]
          Length = 623

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/72 (73%), Positives = 61/72 (84%)
 Frame = +2

Query: 5   DPSGGAYVSVFNEQAEKIIGCSADELDKMKKGGDETSYLLKLKEATWAPHVFCVVVTQTE 184
           DP+G A+VSVFNE AEKIIGCSADELD+++K   + SY+LKLKEATW PH+F V VTQ E
Sbjct: 528 DPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYILKLKEATWVPHLFRVSVTQHE 587

Query: 185 YNNEKRQRITVR 220
           Y NEKRQRITVR
Sbjct: 588 YMNEKRQRITVR 599


>ref|NP_001141474.1| uncharacterized protein LOC100273584 [Zea mays]
           gi|194704722|gb|ACF86445.1| unknown [Zea mays]
           gi|195647462|gb|ACG43199.1| replication protein A 70 kDa
           DNA-binding subunit [Zea mays]
           gi|413956552|gb|AFW89201.1| Replication protein A
           DNA-binding subunit [Zea mays]
          Length = 623

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/72 (73%), Positives = 61/72 (84%)
 Frame = +2

Query: 5   DPSGGAYVSVFNEQAEKIIGCSADELDKMKKGGDETSYLLKLKEATWAPHVFCVVVTQTE 184
           DP+G A+VSVFNE AEKIIGCSADELD+++K   + SY+LKLKEATW PH+F V VTQ E
Sbjct: 528 DPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHE 587

Query: 185 YNNEKRQRITVR 220
           Y NEKRQRITVR
Sbjct: 588 YMNEKRQRITVR 599