BLASTX nr result
ID: Coptis21_contig00037823
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00037823 (397 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002320980.1| predicted protein [Populus trichocarpa] gi|2... 152 3e-35 ref|XP_002515302.1| DNA replication regulator dpb11, putative [R... 147 1e-33 ref|NP_192120.4| transcription coactivator protein [Arabidopsis ... 146 2e-33 gb|AAC78713.1| predicted protein of unknown function [Arabidopsi... 146 2e-33 ref|XP_002270203.2| PREDICTED: BRCT domain-containing protein At... 145 3e-33 >ref|XP_002320980.1| predicted protein [Populus trichocarpa] gi|222861753|gb|EEE99295.1| predicted protein [Populus trichocarpa] Length = 1282 Score = 152 bits (384), Expect = 3e-35 Identities = 70/110 (63%), Positives = 88/110 (80%) Frame = +1 Query: 67 SSIKCFAGVGFVLLGFEPLEKVKVRSKLVSGGGVDVGEYGQRCSHLIVDKIVYDDSECVV 246 S K F GV FVL+GF+P+ K KV+SKLV GGG+D +Y + C+H+IVDKIVYDD CV Sbjct: 6 SPSKTFLGVRFVLVGFDPVNKSKVKSKLVGGGGIDAVQYSENCTHVIVDKIVYDDPVCVG 65 Query: 247 ARADGKVVVTALWVEHCIDVGMLVDSSSILYRPVKDLNGIPGAKSLSICL 396 AR DGK VVT LWV+H D+GM VD++SI+YRP++DLNGIPGAK+L +CL Sbjct: 66 ARNDGKTVVTGLWVDHSFDIGMPVDATSIMYRPLRDLNGIPGAKNLIMCL 115 >ref|XP_002515302.1| DNA replication regulator dpb11, putative [Ricinus communis] gi|223545782|gb|EEF47286.1| DNA replication regulator dpb11, putative [Ricinus communis] Length = 1069 Score = 147 bits (370), Expect = 1e-33 Identities = 65/112 (58%), Positives = 88/112 (78%) Frame = +1 Query: 61 STSSIKCFAGVGFVLLGFEPLEKVKVRSKLVSGGGVDVGEYGQRCSHLIVDKIVYDDSEC 240 + S K F GV FVL GF+P+ +VR+KL+ GGGVD G+Y + C+H+IVDKIVY+D C Sbjct: 3 TASPSKTFLGVRFVLFGFDPINLRQVRAKLIDGGGVDAGQYNENCTHVIVDKIVYNDPIC 62 Query: 241 VVARADGKVVVTALWVEHCIDVGMLVDSSSILYRPVKDLNGIPGAKSLSICL 396 + AR D K +VT LWV+H D+G++VD++SI+YRP++DLNGIPGAKSL +CL Sbjct: 63 IAARNDRKTLVTGLWVDHSYDIGLVVDATSIMYRPLRDLNGIPGAKSLIMCL 114 >ref|NP_192120.4| transcription coactivator protein [Arabidopsis thaliana] gi|363548502|sp|O04251.3|Y4211_ARATH RecName: Full=BRCT domain-containing protein At4g02110 gi|332656725|gb|AEE82125.1| transcription coactivator protein [Arabidopsis thaliana] Length = 1329 Score = 146 bits (368), Expect = 2e-33 Identities = 68/116 (58%), Positives = 89/116 (76%) Frame = +1 Query: 49 LQDGSTSSIKCFAGVGFVLLGFEPLEKVKVRSKLVSGGGVDVGEYGQRCSHLIVDKIVYD 228 +Q S K ++GV F L+GF P+ +RSKLVSGGGVDVG++ Q C+HLIVDK++YD Sbjct: 1 MQSDSGLPPKTYSGVKFALVGFNPIHGNSLRSKLVSGGGVDVGQFTQSCTHLIVDKLLYD 60 Query: 229 DSECVVARADGKVVVTALWVEHCIDVGMLVDSSSILYRPVKDLNGIPGAKSLSICL 396 D CV AR GKVVVT WV+H D+GML +++SILYRP++DLNGIPG+K+L +CL Sbjct: 61 DPICVAARNSGKVVVTGSWVDHSFDIGMLDNANSILYRPLRDLNGIPGSKALVVCL 116 >gb|AAC78713.1| predicted protein of unknown function [Arabidopsis thaliana] gi|7268595|emb|CAB80704.1| predicted protein of unknown function [Arabidopsis thaliana] Length = 1293 Score = 146 bits (368), Expect = 2e-33 Identities = 68/116 (58%), Positives = 89/116 (76%) Frame = +1 Query: 49 LQDGSTSSIKCFAGVGFVLLGFEPLEKVKVRSKLVSGGGVDVGEYGQRCSHLIVDKIVYD 228 +Q S K ++GV F L+GF P+ +RSKLVSGGGVDVG++ Q C+HLIVDK++YD Sbjct: 1 MQSDSGLPPKTYSGVKFALVGFNPIHGNSLRSKLVSGGGVDVGQFTQSCTHLIVDKLLYD 60 Query: 229 DSECVVARADGKVVVTALWVEHCIDVGMLVDSSSILYRPVKDLNGIPGAKSLSICL 396 D CV AR GKVVVT WV+H D+GML +++SILYRP++DLNGIPG+K+L +CL Sbjct: 61 DPICVAARNSGKVVVTGSWVDHSFDIGMLDNANSILYRPLRDLNGIPGSKALVVCL 116 >ref|XP_002270203.2| PREDICTED: BRCT domain-containing protein At4g02110-like [Vitis vinifera] Length = 1314 Score = 145 bits (367), Expect = 3e-33 Identities = 69/110 (62%), Positives = 86/110 (78%) Frame = +1 Query: 67 SSIKCFAGVGFVLLGFEPLEKVKVRSKLVSGGGVDVGEYGQRCSHLIVDKIVYDDSECVV 246 +S F GV FVL GF+P+ + +VRSKLV+GGGVDVG YGQ C+H++VDK+VYDD CV Sbjct: 6 NSFNAFLGVHFVLFGFDPVHEREVRSKLVNGGGVDVGRYGQNCTHVVVDKLVYDDPVCVA 65 Query: 247 ARADGKVVVTALWVEHCIDVGMLVDSSSILYRPVKDLNGIPGAKSLSICL 396 AR DGK++VT+LWV+H D GM V SI+YRP+K LNGIPGA+SL CL Sbjct: 66 ARNDGKMLVTSLWVDHSFDTGMPV-PESIMYRPLKGLNGIPGAESLVACL 114