BLASTX nr result

ID: Coptis21_contig00037783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037783
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28324.3| unnamed protein product [Vitis vinifera]              178   5e-43
ref|XP_002274254.1| PREDICTED: putative phagocytic receptor 1b-l...   178   5e-43
ref|XP_002952428.1| hypothetical protein VOLCADRAFT_75353 [Volvo...   176   2e-42
ref|NP_198547.3| putative endomembrane protein 70 [Arabidopsis t...   174   5e-42
ref|XP_002328257.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42

>emb|CBI28324.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  178 bits (451), Expect = 5e-43
 Identities = 82/140 (58%), Positives = 97/140 (69%)
 Frame = +3

Query: 3   QIFLGGLLPFSAIFIELHYLYTSMWGHKXXXXXXXXXXXXXXXXXXXXXXXXGFTYFQLS 182
           Q+ LGGLLPFSAI +ELH+LY S+WG+K                        G TY QLS
Sbjct: 497 QMILGGLLPFSAIILELHHLYASLWGYKIWTLPGILFIMFIILVLLTAMLSIGLTYVQLS 556

Query: 183 VEDHEWWWSSLLRGGSTSVFIYSYCFIFYGRSSMSGFLQLSFFFGYNACMCYAFFLMLGT 362
           VEDHEWWW SLLRGGST++F++ +C  FY RS MSGF+Q SF+FGYNAC+CYA FLMLGT
Sbjct: 557 VEDHEWWWRSLLRGGSTAIFMFGHCIYFYARSRMSGFMQFSFYFGYNACICYAVFLMLGT 616

Query: 363 IGFYASLLFVRHIYRVVKLE 422
           I F ASL+FVR IY  +K E
Sbjct: 617 ISFRASLMFVRLIYHAIKSE 636


>ref|XP_002274254.1| PREDICTED: putative phagocytic receptor 1b-like [Vitis vinifera]
          Length = 608

 Score =  178 bits (451), Expect = 5e-43
 Identities = 82/140 (58%), Positives = 97/140 (69%)
 Frame = +3

Query: 3   QIFLGGLLPFSAIFIELHYLYTSMWGHKXXXXXXXXXXXXXXXXXXXXXXXXGFTYFQLS 182
           Q+ LGGLLPFSAI +ELH+LY S+WG+K                        G TY QLS
Sbjct: 469 QMILGGLLPFSAIILELHHLYASLWGYKIWTLPGILFIMFIILVLLTAMLSIGLTYVQLS 528

Query: 183 VEDHEWWWSSLLRGGSTSVFIYSYCFIFYGRSSMSGFLQLSFFFGYNACMCYAFFLMLGT 362
           VEDHEWWW SLLRGGST++F++ +C  FY RS MSGF+Q SF+FGYNAC+CYA FLMLGT
Sbjct: 529 VEDHEWWWRSLLRGGSTAIFMFGHCIYFYARSRMSGFMQFSFYFGYNACICYAVFLMLGT 588

Query: 363 IGFYASLLFVRHIYRVVKLE 422
           I F ASL+FVR IY  +K E
Sbjct: 589 ISFRASLMFVRLIYHAIKSE 608


>ref|XP_002952428.1| hypothetical protein VOLCADRAFT_75353 [Volvox carteri f.
           nagariensis] gi|300262364|gb|EFJ46571.1| hypothetical
           protein VOLCADRAFT_75353 [Volvox carteri f. nagariensis]
          Length = 554

 Score =  176 bits (445), Expect = 2e-42
 Identities = 81/141 (57%), Positives = 96/141 (68%), Gaps = 1/141 (0%)
 Frame = +3

Query: 3   QIFLGGLLPFSAIFIELHYLYTSMWGHKXXXXXXXXXXXXXXXXXXXXXXXXGFTYFQLS 182
           Q+ + G LPFSAI+IEL+Y++ S+WGHK                          TYFQL+
Sbjct: 414 QMLMAGFLPFSAIYIELYYIFASIWGHKVYTIYSILFIVFIILIIVTAFITVALTYFQLA 473

Query: 183 VEDHEWWWSSLLRGGSTSVFIYSYCFIFYG-RSSMSGFLQLSFFFGYNACMCYAFFLMLG 359
           VEDH WWW S L GGST +F+Y YCF +Y  RS MSGF+Q SFFFGYNA +CYAFFLMLG
Sbjct: 474 VEDHRWWWRSFLCGGSTGIFVYGYCFYYYYVRSDMSGFMQTSFFFGYNAVVCYAFFLMLG 533

Query: 360 TIGFYASLLFVRHIYRVVKLE 422
           T+GF ASLLFVRHIYR +K E
Sbjct: 534 TVGFRASLLFVRHIYRAIKCE 554


>ref|NP_198547.3| putative endomembrane protein 70 [Arabidopsis thaliana]
           gi|9758717|dbj|BAB09103.1| endosomal protein-like
           [Arabidopsis thaliana] gi|110742157|dbj|BAE99006.1|
           multispanning membrane protein - like [Arabidopsis
           thaliana] gi|332006781|gb|AED94164.1| putative
           endomembrane protein 70 [Arabidopsis thaliana]
          Length = 593

 Score =  174 bits (442), Expect = 5e-42
 Identities = 81/141 (57%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
 Frame = +3

Query: 3   QIFLGGLLPFSAIFIELHYLYTSMWGHKXXXXXXXXXXXXXXXXXXXXXXXXGFTYFQLS 182
           Q+ + G LPFSAI+IEL+Y++ S+WGH+                          TYFQL+
Sbjct: 453 QMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYSILSIVFLILVIVTAFITVALTYFQLA 512

Query: 183 VEDHEWWWSSLLRGGSTSVFIYSYC-FIFYGRSSMSGFLQLSFFFGYNACMCYAFFLMLG 359
            EDHEWWW SLL GGST +FIY+YC + +Y RS MSGF+Q SFFFGY AC+CY FFLMLG
Sbjct: 513 AEDHEWWWRSLLCGGSTGLFIYAYCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLG 572

Query: 360 TIGFYASLLFVRHIYRVVKLE 422
           TIGF ASLLFVRHIYR +K E
Sbjct: 573 TIGFCASLLFVRHIYRSIKCE 593


>ref|XP_002328257.1| predicted protein [Populus trichocarpa] gi|222837772|gb|EEE76137.1|
           predicted protein [Populus trichocarpa]
          Length = 586

 Score =  174 bits (442), Expect = 5e-42
 Identities = 81/140 (57%), Positives = 96/140 (68%)
 Frame = +3

Query: 3   QIFLGGLLPFSAIFIELHYLYTSMWGHKXXXXXXXXXXXXXXXXXXXXXXXXGFTYFQLS 182
           Q+F+GGLLPFSA+ IELH+LY S+WG+K                        G TY QLS
Sbjct: 447 QMFIGGLLPFSAVAIELHHLYASLWGYKICTLPSILFVTFIILIMLTAILSIGMTYIQLS 506

Query: 183 VEDHEWWWSSLLRGGSTSVFIYSYCFIFYGRSSMSGFLQLSFFFGYNACMCYAFFLMLGT 362
           +EDHEWWW SLL GGS ++F++SY   F+ RSSMSGF+QLSFFFGYNACMCYAFFL++GT
Sbjct: 507 MEDHEWWWRSLLCGGSVAIFMFSYGIYFFSRSSMSGFMQLSFFFGYNACMCYAFFLIIGT 566

Query: 363 IGFYASLLFVRHIYRVVKLE 422
           I F AS  FV HIY   K E
Sbjct: 567 ISFRASFAFVCHIYHAAKSE 586


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