BLASTX nr result

ID: Coptis21_contig00037777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037777
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311730.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_003551878.1| PREDICTED: mitotic spindle checkpoint protei...    96   3e-18
ref|XP_003631350.1| PREDICTED: mitotic spindle checkpoint protei...    96   4e-18
ref|XP_003538568.1| PREDICTED: mitotic spindle checkpoint protei...    96   4e-18
gb|ACU23607.1| unknown [Glycine max]                                   96   4e-18

>ref|XP_002311730.1| predicted protein [Populus trichocarpa] gi|222851550|gb|EEE89097.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/99 (52%), Positives = 61/99 (61%)
 Frame = +1

Query: 7   LACAIKFI*HVCFSGVFDVLAYTDNDVEVPFTWVESDPELIENPQMEKLHSFDTKITLFN 186
           +A +I ++  +  S VFDVLAYTD DV VPFTW+ESDP+LI NPQM KLHSFDTK     
Sbjct: 135 IASSITYLPCLDESCVFDVLAYTDKDVAVPFTWIESDPKLIANPQMVKLHSFDTK----- 189

Query: 187 *LF*RSFSIV*NTNMPHLSLQIHKVTTMVSYKNDEWDEE 303
                                IHKV T+VSYKNDEWDE+
Sbjct: 190 ---------------------IHKVDTLVSYKNDEWDEQ 207


>ref|XP_003551878.1| PREDICTED: mitotic spindle checkpoint protein MAD2-like [Glycine
           max]
          Length = 207

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/84 (59%), Positives = 53/84 (63%)
 Frame = +1

Query: 52  VFDVLAYTDNDVEVPFTWVESDPELIENPQMEKLHSFDTKITLFN*LF*RSFSIV*NTNM 231
           VFDVLAYTD DV VPFTWVESDP+LI NPQM KLHSFDTK                    
Sbjct: 150 VFDVLAYTDKDVAVPFTWVESDPKLIANPQMVKLHSFDTK-------------------- 189

Query: 232 PHLSLQIHKVTTMVSYKNDEWDEE 303
                 IHKV T+VSYKNDEWDE+
Sbjct: 190 ------IHKVDTLVSYKNDEWDEQ 207


>ref|XP_003631350.1| PREDICTED: mitotic spindle checkpoint protein MAD2 isoform 2 [Vitis
           vinifera]
          Length = 211

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/84 (58%), Positives = 53/84 (63%)
 Frame = +1

Query: 52  VFDVLAYTDNDVEVPFTWVESDPELIENPQMEKLHSFDTKITLFN*LF*RSFSIV*NTNM 231
           VFDVLAYTD DV VPFTW+ESDP+LI NPQM KLHSFDTK                    
Sbjct: 154 VFDVLAYTDTDVAVPFTWIESDPKLIANPQMVKLHSFDTK-------------------- 193

Query: 232 PHLSLQIHKVTTMVSYKNDEWDEE 303
                 IHKV T+VSYKNDEWDE+
Sbjct: 194 ------IHKVDTLVSYKNDEWDED 211


>ref|XP_003538568.1| PREDICTED: mitotic spindle checkpoint protein MAD2-like [Glycine
           max]
          Length = 207

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/84 (58%), Positives = 53/84 (63%)
 Frame = +1

Query: 52  VFDVLAYTDNDVEVPFTWVESDPELIENPQMEKLHSFDTKITLFN*LF*RSFSIV*NTNM 231
           +FDVLAYTD DV VPFTWVESDP+LI NPQM KLHSFDTK                    
Sbjct: 150 IFDVLAYTDKDVAVPFTWVESDPKLIANPQMVKLHSFDTK-------------------- 189

Query: 232 PHLSLQIHKVTTMVSYKNDEWDEE 303
                 IHKV T+VSYKNDEWDE+
Sbjct: 190 ------IHKVDTLVSYKNDEWDEQ 207


>gb|ACU23607.1| unknown [Glycine max]
          Length = 172

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/84 (58%), Positives = 53/84 (63%)
 Frame = +1

Query: 52  VFDVLAYTDNDVEVPFTWVESDPELIENPQMEKLHSFDTKITLFN*LF*RSFSIV*NTNM 231
           +FDVLAYTD DV VPFTWVESDP+LI NPQM KLHSFDTK                    
Sbjct: 115 IFDVLAYTDKDVAVPFTWVESDPKLIANPQMVKLHSFDTK-------------------- 154

Query: 232 PHLSLQIHKVTTMVSYKNDEWDEE 303
                 IHKV T+VSYKNDEWDE+
Sbjct: 155 ------IHKVDTLVSYKNDEWDEQ 172


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