BLASTX nr result

ID: Coptis21_contig00037743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037743
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271441.1| PREDICTED: random slug protein 5 [Vitis vini...   132   3e-29
emb|CAN59728.1| hypothetical protein VITISV_037736 [Vitis vinifera]   132   3e-29
ref|NP_171669.1| protein sec fourteen-like protein-20 [Arabidops...   130   1e-28
gb|AAL86320.1| putative polyphosphoinositide binding protein [Ar...   130   1e-28
ref|XP_002892050.1| hypothetical protein ARALYDRAFT_470113 [Arab...   128   6e-28

>ref|XP_002271441.1| PREDICTED: random slug protein 5 [Vitis vinifera]
           gi|296085533|emb|CBI29265.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  132 bits (332), Expect = 3e-29
 Identities = 57/76 (75%), Positives = 69/76 (90%)
 Frame = +3

Query: 21  QDCYPERLGKVLLLHVPYIFMTAWKIVYPFIDSNTRNKIVFVESKNLTSTLLQEIDRSQL 200
           QDCYPERLGK+ L+HVPY+FMTAWK+VYPFIDS T+ KI+FVE+KN+ STLL +ID +QL
Sbjct: 171 QDCYPERLGKLFLVHVPYVFMTAWKVVYPFIDSKTKKKIIFVENKNIKSTLLGDIDENQL 230

Query: 201 PDIYGGNLPLVPIEDS 248
           PD+YGG LPLVPI+DS
Sbjct: 231 PDVYGGKLPLVPIQDS 246


>emb|CAN59728.1| hypothetical protein VITISV_037736 [Vitis vinifera]
          Length = 218

 Score =  132 bits (332), Expect = 3e-29
 Identities = 57/76 (75%), Positives = 69/76 (90%)
 Frame = +3

Query: 21  QDCYPERLGKVLLLHVPYIFMTAWKIVYPFIDSNTRNKIVFVESKNLTSTLLQEIDRSQL 200
           QDCYPERLGK+ L+HVPY+FMTAWK+VYPFIDS T+ KI+FVE+KN+ STLL +ID +QL
Sbjct: 143 QDCYPERLGKLFLVHVPYVFMTAWKVVYPFIDSKTKKKIIFVENKNIKSTLLGDIDENQL 202

Query: 201 PDIYGGNLPLVPIEDS 248
           PD+YGG LPLVPI+DS
Sbjct: 203 PDVYGGKLPLVPIQDS 218


>ref|NP_171669.1| protein sec fourteen-like protein-20 [Arabidopsis thaliana]
           gi|8671832|gb|AAF78395.1|AC009273_1 Strong similarity to
           polyphosphoinositide binding protein Ssh2 from soybean
           gb|AF024652. It contains a CRAL/TRIO domain PF|00650.
           EST gb|AI995792 comes from this gene [Arabidopsis
           thaliana] gi|21554088|gb|AAM63169.1|
           polyphosphoinositide binding protein, putative
           [Arabidopsis thaliana] gi|23297520|gb|AAN12987.1|
           putative polyphosphoinositide-binding protein
           [Arabidopsis thaliana] gi|332189193|gb|AEE27314.1|
           protein sec fourteen-like protein-20 [Arabidopsis
           thaliana]
          Length = 255

 Score =  130 bits (327), Expect = 1e-28
 Identities = 56/76 (73%), Positives = 69/76 (90%)
 Frame = +3

Query: 21  QDCYPERLGKVLLLHVPYIFMTAWKIVYPFIDSNTRNKIVFVESKNLTSTLLQEIDRSQL 200
           QDCYPERLGK+ ++H PYIFMTAWK++YPFID+NT+ KIVFVE+K LT TLL++ID SQL
Sbjct: 180 QDCYPERLGKLYIVHAPYIFMTAWKVIYPFIDANTKKKIVFVENKKLTPTLLEDIDESQL 239

Query: 201 PDIYGGNLPLVPIEDS 248
           PDIYGG LPLVPI+++
Sbjct: 240 PDIYGGKLPLVPIQET 255


>gb|AAL86320.1| putative polyphosphoinositide binding protein [Arabidopsis
           thaliana]
          Length = 192

 Score =  130 bits (327), Expect = 1e-28
 Identities = 56/76 (73%), Positives = 69/76 (90%)
 Frame = +3

Query: 21  QDCYPERLGKVLLLHVPYIFMTAWKIVYPFIDSNTRNKIVFVESKNLTSTLLQEIDRSQL 200
           QDCYPERLGK+ ++H PYIFMTAWK++YPFID+NT+ KIVFVE+K LT TLL++ID SQL
Sbjct: 117 QDCYPERLGKLYIVHAPYIFMTAWKVIYPFIDANTKKKIVFVENKKLTPTLLEDIDESQL 176

Query: 201 PDIYGGNLPLVPIEDS 248
           PDIYGG LPLVPI+++
Sbjct: 177 PDIYGGKLPLVPIQET 192


>ref|XP_002892050.1| hypothetical protein ARALYDRAFT_470113 [Arabidopsis lyrata subsp.
           lyrata] gi|297337892|gb|EFH68309.1| hypothetical protein
           ARALYDRAFT_470113 [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score =  128 bits (321), Expect = 6e-28
 Identities = 55/76 (72%), Positives = 68/76 (89%)
 Frame = +3

Query: 21  QDCYPERLGKVLLLHVPYIFMTAWKIVYPFIDSNTRNKIVFVESKNLTSTLLQEIDRSQL 200
           QDCYPERLGK+ ++H PYIFMTAWK++YP ID+NT+ KIVFVE+K LT TLL++ID SQL
Sbjct: 181 QDCYPERLGKLYIVHAPYIFMTAWKVIYPLIDANTKKKIVFVENKKLTPTLLEDIDESQL 240

Query: 201 PDIYGGNLPLVPIEDS 248
           PDIYGG LPLVPI+++
Sbjct: 241 PDIYGGKLPLVPIQET 256


Top