BLASTX nr result

ID: Coptis21_contig00037714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037714
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336038.1| cc-nbs-lrr resistance protein [Populus trich...    72   6e-11
ref|XP_002302958.1| cc-nbs-lrr resistance protein [Populus trich...    69   3e-10
ref|XP_002302957.1| cc-nbs-lrr resistance protein [Populus trich...    67   2e-09
ref|XP_002302959.1| cc-nbs-lrr resistance protein [Populus trich...    65   6e-09
ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_002336038.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222839627|gb|EEE77950.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1052

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1    LESFPAMGIPELRSSIVVLNIVYCNSLISLSEGLRYLSSLETLIIGVCRQLEFSREDFQH 180
            L S P  G+  L SS+  L+I YCN   SLSEG+++L++LE L +  C +L    E  QH
Sbjct: 902  LNSLPMNGLCGL-SSLRHLSIHYCNQFASLSEGVQHLTALEDLNLSHCPELNSLPESIQH 960

Query: 181  LISLRHLQLDWLTMLISIPD-MQSLTALQYFVINNCENLWIFP 306
            L SLR L + + T L S+PD +  LT+L    I  C NL  FP
Sbjct: 961  LSSLRSLSIQYCTGLTSLPDQIGYLTSLSSLNIRGCSNLVSFP 1003



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = +1

Query: 55   LNIVYCNSLISLSEGLRYLSSLETLIIGVCRQLEFSREDFQHLISLRHLQLDWLTMLISI 234
            LN+ +C  L SL E +++LSSL +L I  C  L    +   +L SL  L +   + L+S 
Sbjct: 943  LNLSHCPELNSLPESIQHLSSLRSLSIQYCTGLTSLPDQIGYLTSLSSLNIRGCSNLVSF 1002

Query: 235  PD-MQSLTALQYFVINNCENL 294
            PD +Q+L  L   +INNC NL
Sbjct: 1003 PDGVQTLNNLSKLIINNCPNL 1023


>ref|XP_002302958.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844684|gb|EEE82231.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1086

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1    LESFPAMGIPELRSSIVVLNIVYCNSLISLSEGLRYLSSLETLIIGVCRQLEFSREDFQH 180
            L S P  G+  L SS+  L+I YCN   SLSEG+++L++LE L +  C +L    E  QH
Sbjct: 936  LNSLPMNGLCGL-SSLRHLSIHYCNQFASLSEGVQHLTALEDLNLSHCPELNSLPESIQH 994

Query: 181  LISLRHLQLDWLTMLISIPD-MQSLTALQYFVINNCENLWIFP 306
            L  LR L + + T L S+PD +  LT+L    I  C NL  FP
Sbjct: 995  LSFLRSLSIQYCTGLTSLPDQIGYLTSLSSLNIRGCSNLVSFP 1037


>ref|XP_002302957.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844683|gb|EEE82230.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1085

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 42/103 (40%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1    LESFPAMGIPELRSSIVVLNIVYCNSLISLSEGLRYLSSLETLIIGVCRQLEFSREDFQH 180
            L S P   +  L SS+  L+I +C+   SLSEG+R+L++LE L +  C +L    E  QH
Sbjct: 935  LNSLPMNELCSL-SSLRHLSIHFCDQFASLSEGVRHLTALEDLSLFGCHELNSLPESIQH 993

Query: 181  LISLRHLQLDWLTMLISIPD-MQSLTALQYFVINNCENLWIFP 306
            + SLR L + + T L S+PD +  LT+L    I  C NL  FP
Sbjct: 994  ITSLRSLSIQYCTGLTSLPDQIGYLTSLSSLNIRGCPNLVSFP 1036


>ref|XP_002302959.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844685|gb|EEE82232.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1285

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1    LESFPAMGIPELRSSIVVLNIVYCNSLISLSEGLRYLSSLETLIIGVCRQLEFSREDFQH 180
            L S P  G+  L SS+  L+I  C+   SLSEG+R+L++LE L +  C +L    E  QH
Sbjct: 867  LNSLPMNGLCGL-SSLRRLSIHICDQFASLSEGVRHLTALEDLSLFGCPELNSLPESIQH 925

Query: 181  LISLRHLQLDWLTMLISIPD-MQSLTALQYFVINNCENLWIFP 306
            L SLR L +   T L S+PD ++ LT+L    I +C NL  FP
Sbjct: 926  LSSLRSLSIHHCTGLTSLPDQIRYLTSLSSLNIWDCPNLVSFP 968



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 42/103 (40%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1    LESFPAMGIPELRSSIVVLNIVYCNSLISLSEGLRYLSSLETLIIGVCRQLEFSREDFQH 180
            L S P   +  L SS+  L+I +C+   SLSEG+R+L++LE L +  C +L    E  QH
Sbjct: 1135 LNSLPMNELCSL-SSLRHLSIHFCDQFASLSEGVRHLTALEDLSLFGCHELNSLPESIQH 1193

Query: 181  LISLRHLQLDWLTMLISIPD-MQSLTALQYFVINNCENLWIFP 306
            + SLR L + + T L S+PD +  LT+L    I  C NL  FP
Sbjct: 1194 ITSLRSLSIQYCTGLTSLPDQIGYLTSLSSLNIWGCPNLVSFP 1236


>ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|222844717|gb|EEE82264.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = +1

Query: 25  IPELRSSIVVLNIVYCNSLISLSEGLRYLSSLETLIIGVCRQLEFSREDFQHLISLRHLQ 204
           +P L SSI  L+I+ C  L S+SEGL++L++L+ L +  C +L    E  QHL SL  L+
Sbjct: 332 LPGLPSSIASLDILDCQELTSISEGLQHLTALKDLYLHGCVKLNSLPESIQHLTSLSRLR 391

Query: 205 LDWLTMLISIPD-MQSLTALQYFVINNCENL 294
           +   + L+S+P+ +++L  L+  VI  C NL
Sbjct: 392 IHGCSNLMSLPEGIRNLEMLRELVITECRNL 422


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