BLASTX nr result

ID: Coptis21_contig00037711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037711
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26155.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002277316.1| PREDICTED: S-adenosylmethionine decarboxylas...   124   1e-26
emb|CAN76568.1| hypothetical protein VITISV_030214 [Vitis vinifera]   124   1e-26
ref|XP_003542902.1| PREDICTED: S-adenosylmethionine decarboxylas...   120   9e-26
ref|XP_002516818.1| s-adenosylmethionine decarboxylase, putative...   116   2e-24

>emb|CBI26155.3| unnamed protein product [Vitis vinifera]
          Length = 335

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/80 (73%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
 Frame = -1

Query: 239 REMTMATGINDIIPSALMCDFAFDPCGYSMNGIDGVHYSTIHVTPEDGYSYASFELM-AC 63
           +EMT  TGI DI P AL+CDFAFDPCGYSMNGIDG  YSTIHVTPEDGYSYASFE + + 
Sbjct: 181 KEMTELTGIGDINPGALICDFAFDPCGYSMNGIDGDRYSTIHVTPEDGYSYASFECVGSI 240

Query: 62  TDDRNDIDDILRKVVQVFRP 3
            DD+ND+  +L+KVVQVFRP
Sbjct: 241 YDDQNDVVQVLKKVVQVFRP 260


>ref|XP_002277316.1| PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Vitis
           vinifera]
          Length = 350

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/80 (73%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
 Frame = -1

Query: 239 REMTMATGINDIIPSALMCDFAFDPCGYSMNGIDGVHYSTIHVTPEDGYSYASFELM-AC 63
           +EMT  TGI DI P AL+CDFAFDPCGYSMNGIDG  YSTIHVTPEDGYSYASFE + + 
Sbjct: 209 KEMTELTGIGDINPGALICDFAFDPCGYSMNGIDGDRYSTIHVTPEDGYSYASFECVGSI 268

Query: 62  TDDRNDIDDILRKVVQVFRP 3
            DD+ND+  +L+KVVQVFRP
Sbjct: 269 YDDQNDVVQVLKKVVQVFRP 288


>emb|CAN76568.1| hypothetical protein VITISV_030214 [Vitis vinifera]
          Length = 350

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/80 (73%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
 Frame = -1

Query: 239 REMTMATGINDIIPSALMCDFAFDPCGYSMNGIDGVHYSTIHVTPEDGYSYASFELM-AC 63
           +EMT  TGI DI P AL+CDFAFDPCGYSMNGIDG  YSTIHVTPEDGYSYASFE + + 
Sbjct: 209 KEMTELTGIGDINPGALICDFAFDPCGYSMNGIDGDRYSTIHVTPEDGYSYASFECVGSI 268

Query: 62  TDDRNDIDDILRKVVQVFRP 3
            DD+ND+  +L+KVVQVFRP
Sbjct: 269 YDDQNDVVQVLKKVVQVFRP 288


>ref|XP_003542902.1| PREDICTED: S-adenosylmethionine decarboxylase proenzyme 3-like
           [Glycine max]
          Length = 350

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/79 (70%), Positives = 65/79 (82%)
 Frame = -1

Query: 239 REMTMATGINDIIPSALMCDFAFDPCGYSMNGIDGVHYSTIHVTPEDGYSYASFELMACT 60
           +EMT  TG+++I P AL+CDFAFDPCGYSMNGIDG  YSTIHVTPEDGYSYASFE +   
Sbjct: 215 KEMTEITGVDEINPQALVCDFAFDPCGYSMNGIDGEWYSTIHVTPEDGYSYASFECVGSV 274

Query: 59  DDRNDIDDILRKVVQVFRP 3
           +D  DI  +LRKVVQ+FRP
Sbjct: 275 NDDVDILHVLRKVVQIFRP 293


>ref|XP_002516818.1| s-adenosylmethionine decarboxylase, putative [Ricinus communis]
           gi|223543906|gb|EEF45432.1| s-adenosylmethionine
           decarboxylase, putative [Ricinus communis]
          Length = 342

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -1

Query: 239 REMTMATGINDIIPSALMCDFAFDPCGYSMNGIDGVHYSTIHVTPEDGYSYASFELMAC- 63
           +EMT  TGI DI P A++CDFAFDPCGYSMNGID   YSTIHVTPEDGYSYASFE +   
Sbjct: 209 KEMTKLTGIGDINPGAIICDFAFDPCGYSMNGIDSDRYSTIHVTPEDGYSYASFECVGSI 268

Query: 62  -TDDRNDIDDILRKVVQVFRP 3
             D  +D+ ++L+KVVQVFRP
Sbjct: 269 FDDSDDDVAEVLKKVVQVFRP 289


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