BLASTX nr result
ID: Coptis21_contig00037702
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00037702 (383 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002521133.1| pentatricopeptide repeat-containing protein,... 143 1e-32 ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containi... 141 5e-32 emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera] 141 5e-32 ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|2... 139 3e-31 ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cuc... 135 3e-30 >ref|XP_002521133.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223539702|gb|EEF41284.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 274 Score = 143 bits (361), Expect = 1e-32 Identities = 62/94 (65%), Positives = 82/94 (87%) Frame = +1 Query: 100 WNVMVCGYTKIGNFDVARSMFNDMPLKTLPTWNAMIAGYAQNGLFKEAVEIFHEMQLGNE 279 WNVM+ GY ++G+ V+R +F++MP +T+ +WN MI+GYAQNG FKEA+E+FH+MQ+ + Sbjct: 96 WNVMIDGYVRLGDLAVSRDLFDNMPYRTVVSWNVMISGYAQNGYFKEAIELFHDMQMDDM 155 Query: 280 CPNYVTLVSVLPAISRLGALELGKWVHVYAERND 381 PNYVTLVSVLPAISRLGALELGKWVH+YAE+N+ Sbjct: 156 SPNYVTLVSVLPAISRLGALELGKWVHLYAEKNN 189 >ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like [Vitis vinifera] Length = 631 Score = 141 bits (356), Expect = 5e-32 Identities = 73/139 (52%), Positives = 97/139 (69%), Gaps = 15/139 (10%) Frame = +1 Query: 10 NSMIVAYTSRGGIEAAKELF---------DEMPDKNEKS------WNVMVCGYTKIGNFD 144 ++++ Y S G +E A LF D + DK + WNVM+ GY +IG + Sbjct: 151 SNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELE 210 Query: 145 VARSMFNDMPLKTLPTWNAMIAGYAQNGLFKEAVEIFHEMQLGNECPNYVTLVSVLPAIS 324 VAR++F++MP +++ +WN MIAGYAQ+G FKEAVE+F EMQ+ PNYVTLVSVLPA+S Sbjct: 211 VARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMS 270 Query: 325 RLGALELGKWVHVYAERND 381 RLGALELGKWVH+YA RN+ Sbjct: 271 RLGALELGKWVHLYAVRNN 289 Score = 58.9 bits (141), Expect = 4e-07 Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 39/157 (24%) Frame = +1 Query: 1 LSWNSMIVAYTSRGGIEAAKELFDEMP--------------------------------- 81 +SWN MI Y G + A E+F EM Sbjct: 225 VSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLY 284 Query: 82 ------DKNEKSWNVMVCGYTKIGNFDVARSMFNDMPLKTLPTWNAMIAGYAQNGLFKEA 243 ++ + ++ Y K G+ + A +F +P + + TW+ +IAG A +G K+ Sbjct: 285 AVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDT 344 Query: 244 VEIFHEMQLGNECPNYVTLVSVLPAISRLGALELGKW 354 ++ F +M+ P+ VT + +L A S G + G+W Sbjct: 345 LDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRW 381 >emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera] Length = 613 Score = 141 bits (356), Expect = 5e-32 Identities = 73/139 (52%), Positives = 97/139 (69%), Gaps = 15/139 (10%) Frame = +1 Query: 10 NSMIVAYTSRGGIEAAKELF---------DEMPDKNEKS------WNVMVCGYTKIGNFD 144 ++++ Y S G +E A LF D + DK + WNVM+ GY +IG + Sbjct: 128 SNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELE 187 Query: 145 VARSMFNDMPLKTLPTWNAMIAGYAQNGLFKEAVEIFHEMQLGNECPNYVTLVSVLPAIS 324 VAR++F++MP +++ +WN MIAGYAQ+G FKEAVE+F EMQ+ PNYVTLVSVLPA+S Sbjct: 188 VARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMS 247 Query: 325 RLGALELGKWVHVYAERND 381 RLGALELGKWVH+YA RN+ Sbjct: 248 RLGALELGKWVHLYAVRNN 266 Score = 58.9 bits (141), Expect = 4e-07 Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 39/157 (24%) Frame = +1 Query: 1 LSWNSMIVAYTSRGGIEAAKELFDEMP--------------------------------- 81 +SWN MI Y G + A E+F EM Sbjct: 202 VSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLY 261 Query: 82 ------DKNEKSWNVMVCGYTKIGNFDVARSMFNDMPLKTLPTWNAMIAGYAQNGLFKEA 243 ++ + ++ Y K G+ + A +F +P + + TW+ +IAG A +G K+ Sbjct: 262 AVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDT 321 Query: 244 VEIFHEMQLGNECPNYVTLVSVLPAISRLGALELGKW 354 ++ F +M+ P+ VT + +L A S G + G+W Sbjct: 322 LDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRW 358 >ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa] Length = 629 Score = 139 bits (349), Expect = 3e-31 Identities = 65/125 (52%), Positives = 94/125 (75%), Gaps = 1/125 (0%) Frame = +1 Query: 10 NSMIVAYTSRGGIEAAKELFDEMP-DKNEKSWNVMVCGYTKIGNFDVARSMFNDMPLKTL 186 ++++ Y G ++ A LF + + N WNVM+ GY ++G+ +R +F+ MP K++ Sbjct: 162 SNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSV 221 Query: 187 PTWNAMIAGYAQNGLFKEAVEIFHEMQLGNECPNYVTLVSVLPAISRLGALELGKWVHVY 366 +WN MI+G AQNG FKEA+E+FH+MQLG+ PNYVTLVSVLPA+SRLGA+ELGKWVH++ Sbjct: 222 VSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLF 281 Query: 367 AERND 381 AE+N+ Sbjct: 282 AEKNE 286 >ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus] Length = 2355 Score = 135 bits (341), Expect = 3e-30 Identities = 62/127 (48%), Positives = 90/127 (70%), Gaps = 1/127 (0%) Frame = +1 Query: 1 LSWNSMIVAYTSRGGIEAAKELFDEMPDKNEKSWNVMVCGYTKIGNFDVARSMFNDMPLK 180 +SWN++I Y G ++ A+ +FD M +KN SW+ M+ GY ++GN + AR +F +MP++ Sbjct: 194 VSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMR 253 Query: 181 TLPTWNAMIAGYAQNGLFKEAVEIFHEMQ-LGNECPNYVTLVSVLPAISRLGALELGKWV 357 + +WNAMIAGYAQN + +A+E+F +MQ G PN VTLVSVL A + LGAL+LGKW+ Sbjct: 254 NVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWI 313 Query: 358 HVYAERN 378 H + RN Sbjct: 314 HRFIRRN 320