BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037697
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   104   7e-21
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   100   9e-20
ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containi...    98   8e-19
ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18

>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/95 (53%), Positives = 70/95 (73%)
 Frame = +2

Query: 2   QGHCQACDIDQAMKCFTKMLEKKVDVDANVLEVLVNGLCGQGRVDGAYNLGIEMIDKADM 181
           QGHC A ++D+A+ CF KM+EK  D DA++LEVL+NG   Q R+DGAY L +EM++ A +
Sbjct: 450 QGHCAAKEVDKALICFAKMMEKNCDADADLLEVLINGFLSQKRIDGAYKLLVEMVNTAHL 509

Query: 182 RPLEATYNNLIHILLQERKVKEATNLLCLMKKHNF 286
            P +ATY  +I+ LL  RK++EA NLL LMKK N+
Sbjct: 510 VPWQATYKLMINKLLGVRKLEEAINLLHLMKKQNY 544


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/94 (53%), Positives = 68/94 (72%)
 Frame = +2

Query: 2   QGHCQACDIDQAMKCFTKMLEKKVDVDANVLEVLVNGLCGQGRVDGAYNLGIEMIDKADM 181
           QGHC A ++ +A+ C  KM+EK  D DA++L VL+N    Q R+DGAY L ++M+DKA +
Sbjct: 448 QGHCVANEVGKALMCLAKMMEKHCDPDADLLAVLINAFLSQKRIDGAYTLFMDMVDKARL 507

Query: 182 RPLEATYNNLIHILLQERKVKEATNLLCLMKKHN 283
           RP +ATY  LI  LL+ RK++EA NLL LMK+HN
Sbjct: 508 RPWQATYKLLIEKLLEVRKLEEALNLLRLMKQHN 541


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/95 (51%), Positives = 69/95 (72%)
 Frame = +2

Query: 2   QGHCQACDIDQAMKCFTKMLEKKVDVDANVLEVLVNGLCGQGRVDGAYNLGIEMIDKADM 181
           QGHC A ++D A+ CF KM+EK  D DA++L+VL++G   Q +++GAY L IE+ +KA +
Sbjct: 443 QGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHV 502

Query: 182 RPLEATYNNLIHILLQERKVKEATNLLCLMKKHNF 286
           RP +ATY  LI  LL+ RK++EA  LL LMKK N+
Sbjct: 503 RPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNY 537


>ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Brachypodium distachyon]
          Length = 585

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/95 (46%), Positives = 67/95 (70%)
 Frame = +2

Query: 2   QGHCQACDIDQAMKCFTKMLEKKVDVDANVLEVLVNGLCGQGRVDGAYNLGIEMIDKADM 181
           QGHC A ++D+A++  T+M+E  +D DA++L+V+V GLC Q +VD AY L +EM+DKA +
Sbjct: 405 QGHCTAGEVDKALQYLTEMIENNLDADADLLDVMVRGLCNQDKVDAAYTLFVEMVDKAQL 464

Query: 182 RPLEATYNNLIHILLQERKVKEATNLLCLMKKHNF 286
            P + TY ++I  LL+ +K++EA  LL  MK   F
Sbjct: 465 NPWQGTYKHIISELLRVKKLEEALGLLKSMKARKF 499


>ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|222868635|gb|EEF05766.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/95 (50%), Positives = 65/95 (68%)
 Frame = +2

Query: 2   QGHCQACDIDQAMKCFTKMLEKKVDVDANVLEVLVNGLCGQGRVDGAYNLGIEMIDKADM 181
           QGH  A  +D+ + C  KM EK  D DA++L+VLV G   Q ++DGAY   +EM++K  +
Sbjct: 297 QGHFAANQVDKGLLCLVKMTEKNTDPDADLLDVLVKGFLSQRKMDGAYTFLVEMVNKLRL 356

Query: 182 RPLEATYNNLIHILLQERKVKEATNLLCLMKKHNF 286
            P +ATY  LI  LLQ RK++EAT+LL LMKKHN+
Sbjct: 357 VPWQATYKLLIEKLLQVRKLEEATDLLRLMKKHNY 391