BLASTX nr result

ID: Coptis21_contig00037674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037674
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323772.1| predicted protein [Populus trichocarpa] gi|1...    60   1e-07
gb|ABK93590.1| unknown [Populus trichocarpa]                           60   1e-07
gb|EEC76205.1| hypothetical protein OsI_13555 [Oryza sativa Indi...    60   2e-07
gb|AAR01666.1| putative ribosomal protein L13a [Oryza sativa Jap...    59   5e-07
gb|ABF98948.1| 60S ribosomal protein L13a-2, putative [Oryza sat...    58   7e-07

>ref|XP_002323772.1| predicted protein [Populus trichocarpa] gi|118488226|gb|ABK95932.1|
           unknown [Populus trichocarpa]
           gi|222866774|gb|EEF03905.1| predicted protein [Populus
           trichocarpa]
          Length = 206

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -3

Query: 415 RLQPGHKYCLLGQLSHEVGWNHYETIK 335
           RLQPGHKYCLLGQLS EVGWNHY+TIK
Sbjct: 133 RLQPGHKYCLLGQLSSEVGWNHYDTIK 159


>gb|ABK93590.1| unknown [Populus trichocarpa]
          Length = 206

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -3

Query: 415 RLQPGHKYCLLGQLSHEVGWNHYETIK 335
           RLQPGHKYCLLGQLS EVGWNHY+TIK
Sbjct: 133 RLQPGHKYCLLGQLSSEVGWNHYDTIK 159


>gb|EEC76205.1| hypothetical protein OsI_13555 [Oryza sativa Indica Group]
          Length = 101

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -3

Query: 415 RLQPGHKYCLLGQLSHEVGWNHYETIKVYF 326
           RLQPGHKYCLLGQLS EVGWN+Y+TI+V F
Sbjct: 67  RLQPGHKYCLLGQLSKEVGWNYYDTIRVSF 96


>gb|AAR01666.1| putative ribosomal protein L13a [Oryza sativa Japonica Group]
          Length = 172

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = -3

Query: 415 RLQPGHKYCLLGQLSHEVGWNHYETIKVYFL 323
           RLQPGHKYCLLGQLS EVGWN+Y+TI++  L
Sbjct: 107 RLQPGHKYCLLGQLSKEVGWNYYDTIRICVL 137


>gb|ABF98948.1| 60S ribosomal protein L13a-2, putative [Oryza sativa Japonica
           Group]
          Length = 122

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = -3

Query: 415 RLQPGHKYCLLGQLSHEVGWNHYETIKV 332
           RLQPGHKYCLLGQLS EVGWN+Y+TI++
Sbjct: 67  RLQPGHKYCLLGQLSKEVGWNYYDTIRI 94


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