BLASTX nr result

ID: Coptis21_contig00037654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037654
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   2e-09
gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...    65   6e-09
gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indi...    63   3e-08
ref|XP_002447968.1| hypothetical protein SORBIDRAFT_06g019043 [S...    59   5e-07
ref|XP_002335943.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
 Frame = -2

Query: 269 FNNVLYTNERVGCDAVHPKEVEEFMDCLISTGLIDMKFSGCYYTWSNNAEGVHRKMSKID 90
           FN V ++N+R+    V   E E+F   L+ + LI+ + +  YY+WSN++ G  R +S+ID
Sbjct: 138 FNAVCHSNDRLYGTLVTDAETEDFQQFLLQSNLIESRSTWSYYSWSNSSIGRDRVLSRID 197

Query: 89  RVLVNVTWSNLFL-TEATFTPPGISDRS 9
           +  VN+ W  ++      + PPGISD S
Sbjct: 198 KAYVNLVWLGMYAEVSVQYLPPGISDHS 225


>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = -2

Query: 269 FNNVLYTNERVGCDAVHPKEVEEFMDCLISTGLIDMKFSGCYYTWSNNAEGVHRKMSKID 90
           FNNVL  ++R   + V   E+++F DCL+   L +++  G YYTW NN     R  SKID
Sbjct: 658 FNNVLLVDDRRNGNPVTQHEIQDFSDCLLHNRLSEVRTIGDYYTWCNNQTSGDRIYSKID 717

Query: 89  RVLVNVTWSNLFLTE-ATFTPPGISD 15
           R + N +W   F        P G+SD
Sbjct: 718 RFIANTSWLQKFTNAVGEVLPKGVSD 743


>gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indica Group]
          Length = 405

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 26/71 (36%), Positives = 42/71 (59%)
 Frame = -2

Query: 266 NNVLYTNERVGCDAVHPKEVEEFMDCLISTGLIDMKFSGCYYTWSNNAEGVHRKMSKIDR 87
           N+++Y NE++ C  V+   + +F   + + GLID+ ++G  YTWSN   G    + ++DR
Sbjct: 5   NDIMYDNEKLSCSPVNSSRISQFPRHIHNLGLIDLGYNGPAYTWSNKKNGCDLVLERLDR 64

Query: 86  VLVNVTWSNLF 54
            L NV W  LF
Sbjct: 65  CLANVEWCMLF 75


>ref|XP_002447968.1| hypothetical protein SORBIDRAFT_06g019043 [Sorghum bicolor]
           gi|241939151|gb|EES12296.1| hypothetical protein
           SORBIDRAFT_06g019043 [Sorghum bicolor]
          Length = 678

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/72 (37%), Positives = 40/72 (55%)
 Frame = -2

Query: 269 FNNVLYTNERVGCDAVHPKEVEEFMDCLISTGLIDMKFSGCYYTWSNNAEGVHRKMSKID 90
           FN +L  NE+ G      ++++ F D L + G  D+ FSG  YTW N  EG H    ++D
Sbjct: 394 FNEILEANEQFGGVQRPERQMDGFRDALSACGFFDLGFSGLPYTWDNRQEGNHNIKVRLD 453

Query: 89  RVLVNVTWSNLF 54
           R   N T+++LF
Sbjct: 454 RAFANATFADLF 465


>ref|XP_002335943.1| predicted protein [Populus trichocarpa] gi|222836494|gb|EEE74901.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = -2

Query: 269 FNNVLYTNERVGCDAVHPKEVEEFMDCLISTGLIDMKFSGCYYTWSNNAEGVHRKMSKID 90
           FN +   ++R+G        ++    C+    + D+++SG +YTWSN     +  M K+D
Sbjct: 200 FNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCP-ENLIMRKLD 258

Query: 89  RVLVNVTWS-NLFLTEATFTPPGISDRS 9
           RVLVN  W+ N  L+EA F P G+SD S
Sbjct: 259 RVLVNEKWNLNFPLSEARFLPSGMSDHS 286


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