BLASTX nr result

ID: Coptis21_contig00037653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037653
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81126.1| hypothetical protein VITISV_013166 [Vitis vinifera]    59   1e-09
ref|XP_002522536.1| hypothetical protein RCOM_1013810 [Ricinus c...    56   3e-08
emb|CBI30658.3| unnamed protein product [Vitis vinifera]               62   6e-08

>emb|CAN81126.1| hypothetical protein VITISV_013166 [Vitis vinifera]
          Length = 649

 Score = 59.3 bits (142), Expect(2) = 1e-09
 Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
 Frame = +3

Query: 6   RSKKSAFNFDKLDMDFSLDGDFSKKMSSFNVDMSDLDFXXXXXXXXXXXERSTEESIN-- 179
           + K +AFNF K+DMDF+LDGDF  K+SSF VDMSDLDF           E S E+S+N  
Sbjct: 53  KGKTTAFNFSKMDMDFNLDGDFG-KISSFKVDMSDLDF--SPKKTGKSKEXSGEDSVNRN 109

Query: 180 --GKQ 188
             GKQ
Sbjct: 110 HQGKQ 114



 Score = 28.1 bits (61), Expect(2) = 1e-09
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 223 DFNELDSLEFGSDLMKGEKKS 285
           DFN+LD+  F   L K EKKS
Sbjct: 122 DFNDLDTFNFEPSLTKAEKKS 142


>ref|XP_002522536.1| hypothetical protein RCOM_1013810 [Ricinus communis]
           gi|223538227|gb|EEF39836.1| hypothetical protein
           RCOM_1013810 [Ricinus communis]
          Length = 807

 Score = 55.8 bits (133), Expect(2) = 3e-08
 Identities = 29/57 (50%), Positives = 35/57 (61%)
 Frame = +3

Query: 12  KKSAFNFDKLDMDFSLDGDFSKKMSSFNVDMSDLDFXXXXXXXXXXXERSTEESING 182
           KK  FNFD LDMDF+LDGDF  K++SF VDM +LDF           E S  +S +G
Sbjct: 51  KKKTFNFDNLDMDFNLDGDFD-KLASFKVDMPELDFSSPCKNTAKSKESSKGDSSSG 106



 Score = 26.6 bits (57), Expect(2) = 3e-08
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 223 DFNELDSLEFGSDLMKGEK 279
           +FN+LD+  FG  L +GEK
Sbjct: 120 EFNDLDNFNFGPTLTEGEK 138


>emb|CBI30658.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
 Frame = +3

Query: 6   RSKKSAFNFDKLDMDFSLDGDFSKKMSSFNVDMSDLDFXXXXXXXXXXXERSTEESIN-- 179
           + K +AFNF K+DMDF+LDGDF  K+SSF VDMSDLDF           ERS E+S+N  
Sbjct: 18  KGKTTAFNFSKMDMDFNLDGDFG-KISSFKVDMSDLDF--SPKKTGKSKERSGEDSVNRN 74

Query: 180 --GKQ 188
             GKQ
Sbjct: 75  HQGKQ 79


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