BLASTX nr result

ID: Coptis21_contig00037632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037632
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319522.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|NP_187199.2| cell cycle checkpoint control-like protein [Ara...    93   3e-17
emb|CAD29645.1| putative auxin response factor 75 [Arabidopsis t...    93   3e-17
ref|NP_001189815.1| cell cycle checkpoint control-like protein [...    93   3e-17
ref|XP_002279397.1| PREDICTED: cell cycle checkpoint control pro...    92   4e-17

>ref|XP_002319522.1| predicted protein [Populus trichocarpa] gi|222857898|gb|EEE95445.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 50/79 (63%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
 Frame = -2

Query: 231 YFEKAGEPILMTPKFGLDDGMNSDFDVTLVLATMLVSQLQEGIPLEHPVAGAPTD--NGR 58
           Y EKAGEPILM PKFGLDDG +S+FD TLVLATML+SQL EG P E P A A  +  +G 
Sbjct: 249 YLEKAGEPILMAPKFGLDDGSSSNFDATLVLATMLISQLHEGNPPEPPQATARGEAADGT 308

Query: 57  DSQAQQDRSRAAMSENPSD 1
            SQ QQ+R    +SE+PSD
Sbjct: 309 GSQGQQERCGVNVSEHPSD 327


>ref|NP_187199.2| cell cycle checkpoint control-like protein [Arabidopsis thaliana]
           gi|115646872|gb|ABJ17148.1| At3g05480 [Arabidopsis
           thaliana] gi|332640724|gb|AEE74245.1| cell cycle
           checkpoint control-like protein [Arabidopsis thaliana]
          Length = 439

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 51/80 (63%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
 Frame = -2

Query: 231 YFEKAGEPILMTPKFGLDDGMNSDFDVTLVLATMLVSQLQEGIPLEHPVAGAPTDNGRDS 52
           +FEKAGEPILM PKFGL DG +S FD TLVLATMLVSQLQEGIP E P A   T      
Sbjct: 249 FFEKAGEPILMAPKFGLGDGSSSSFDATLVLATMLVSQLQEGIPAEPPEAANSTGGHAAE 308

Query: 51  QA---QQDRSRAAMSENPSD 1
           Q     Q+RSR   SE+PSD
Sbjct: 309 QVGSRPQERSRQNASEHPSD 328


>emb|CAD29645.1| putative auxin response factor 75 [Arabidopsis thaliana]
          Length = 439

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 51/80 (63%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
 Frame = -2

Query: 231 YFEKAGEPILMTPKFGLDDGMNSDFDVTLVLATMLVSQLQEGIPLEHPVAGAPTDNGRDS 52
           +FEKAGEPILM PKFGL DG +S FD TLVLATMLVSQLQEGIP E P A   T      
Sbjct: 249 FFEKAGEPILMAPKFGLGDGSSSSFDATLVLATMLVSQLQEGIPAEPPEAANSTGGHAAE 308

Query: 51  QA---QQDRSRAAMSENPSD 1
           Q     Q+RSR   SE+PSD
Sbjct: 309 QVGSRPQERSRQNASEHPSD 328


>ref|NP_001189815.1| cell cycle checkpoint control-like protein [Arabidopsis thaliana]
           gi|332640726|gb|AEE74247.1| cell cycle checkpoint
           control-like protein [Arabidopsis thaliana]
          Length = 456

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 51/80 (63%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
 Frame = -2

Query: 231 YFEKAGEPILMTPKFGLDDGMNSDFDVTLVLATMLVSQLQEGIPLEHPVAGAPTDNGRDS 52
           +FEKAGEPILM PKFGL DG +S FD TLVLATMLVSQLQEGIP E P A   T      
Sbjct: 266 FFEKAGEPILMAPKFGLGDGSSSSFDATLVLATMLVSQLQEGIPAEPPEAANSTGGHAAE 325

Query: 51  QA---QQDRSRAAMSENPSD 1
           Q     Q+RSR   SE+PSD
Sbjct: 326 QVGSRPQERSRQNASEHPSD 345


>ref|XP_002279397.1| PREDICTED: cell cycle checkpoint control protein RAD9A [Vitis
           vinifera] gi|296089705|emb|CBI39524.3| unnamed protein
           product [Vitis vinifera]
          Length = 447

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/81 (61%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
 Frame = -2

Query: 231 YFEKAGEPILMTPKFGLDDGMNSDFDVTLVLATMLVSQLQEGIPLEHPVAG----APTDN 64
           +FEKAGEPILM PKFGLDDG +S+FD TLVLATML SQL EG P + P A        D+
Sbjct: 249 FFEKAGEPILMAPKFGLDDGSSSNFDATLVLATMLTSQLHEGNPSQAPPADDVMIGQADH 308

Query: 63  GRDSQAQQDRSRAAMSENPSD 1
           G  SQAQQ   RA +S +PSD
Sbjct: 309 GMGSQAQQGIPRANVSGHPSD 329


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