BLASTX nr result

ID: Coptis21_contig00037620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037620
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158944.1| PREDICTED: mitochondrial Rho GTPase 1-A-like...   131   7e-29
ref|XP_004148893.1| PREDICTED: LOW QUALITY PROTEIN: mitochondria...   131   7e-29
ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   128   4e-28
ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   128   4e-28
gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp....   128   4e-28

>ref|XP_004158944.1| PREDICTED: mitochondrial Rho GTPase 1-A-like [Cucumis sativus]
          Length = 453

 Score =  131 bits (329), Expect = 7e-29
 Identities = 69/128 (53%), Positives = 87/128 (67%), Gaps = 5/128 (3%)
 Frame = +2

Query: 11  KEVLVEITKKFPEIESCIECSAANPFEVLEVISCIQRAVLFPQGLLYHPETQKLKPECEK 190
           ++++  I K+F EIE+CIECSAA   +V EV    QRAVL P   L+  E Q LKP C+ 
Sbjct: 135 EDIVAPIMKQFREIETCIECSAATLLQVPEVFYYAQRAVLHPTAPLFDLERQSLKPRCKN 194

Query: 191 ALKWVFKLCDRDLDGALSDEELNDFLGKCL-----PSQIEVIKADIKERLPNGFNDCGLT 355
           AL+ VF LCDRD+DGALSDEELN+F  KC      P++I  +K  ++E LP+G ND GLT
Sbjct: 195 ALRRVFTLCDRDMDGALSDEELNEFQVKCFNAPLQPAEIVGVKRIVQENLPSGVNDRGLT 254

Query: 356 LMGFLSLH 379
           L GFL LH
Sbjct: 255 LPGFLFLH 262


>ref|XP_004148893.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial Rho GTPase 1-like
           [Cucumis sativus]
          Length = 639

 Score =  131 bits (329), Expect = 7e-29
 Identities = 69/128 (53%), Positives = 87/128 (67%), Gaps = 5/128 (3%)
 Frame = +2

Query: 11  KEVLVEITKKFPEIESCIECSAANPFEVLEVISCIQRAVLFPQGLLYHPETQKLKPECEK 190
           ++++  I K+F EIE+CIECSAA   +V EV    QRAVL P   L+  E Q LKP C+ 
Sbjct: 135 EDIVAPIMKQFREIETCIECSAATLLQVPEVFYYAQRAVLHPTAPLFDLERQSLKPRCKN 194

Query: 191 ALKWVFKLCDRDLDGALSDEELNDFLGKCL-----PSQIEVIKADIKERLPNGFNDCGLT 355
           AL+ VF LCDRD+DGALSDEELN+F  KC      P++I  +K  ++E LP+G ND GLT
Sbjct: 195 ALRRVFTLCDRDMDGALSDEELNEFQVKCFNAPLQPAEIVGVKRIVQENLPSGVNDRGLT 254

Query: 356 LMGFLSLH 379
           L GFL LH
Sbjct: 255 LPGFLFLH 262


>ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 648

 Score =  128 bits (322), Expect = 4e-28
 Identities = 68/128 (53%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
 Frame = +2

Query: 11  KEVLVEITKKFPEIESCIECSAANPFEVLEVISCIQRAVLFPQGLLYHPETQKLKPECEK 190
           ++V+  I ++F EIE+CIECSA    ++ EV    Q+AVL P G L+  ETQ LKP C +
Sbjct: 141 EQVMSPIMQQFREIETCIECSAFKHIQIPEVFYYAQKAVLHPTGPLFDQETQTLKPRCVR 200

Query: 191 ALKWVFKLCDRDLDGALSDEELNDFLGKCL-----PSQIEVIKADIKERLPNGFNDCGLT 355
           ALK +F LCD D DGALSD ELNDF  KC      PS+I  +K  ++E+LP G ND GLT
Sbjct: 201 ALKRIFILCDHDKDGALSDAELNDFQVKCFNAPLQPSEIVGVKRVVQEKLPEGVNDHGLT 260

Query: 356 LMGFLSLH 379
           L GFL LH
Sbjct: 261 LTGFLFLH 268


>ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 647

 Score =  128 bits (322), Expect = 4e-28
 Identities = 68/128 (53%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
 Frame = +2

Query: 11  KEVLVEITKKFPEIESCIECSAANPFEVLEVISCIQRAVLFPQGLLYHPETQKLKPECEK 190
           ++V+  I ++F EIE+CIECSA    ++ EV    Q+AVL P G L+  ETQ LKP C +
Sbjct: 141 EQVMSPIMQQFREIETCIECSAFKHIQIPEVFYYAQKAVLHPTGPLFDQETQTLKPRCVR 200

Query: 191 ALKWVFKLCDRDLDGALSDEELNDFLGKCL-----PSQIEVIKADIKERLPNGFNDCGLT 355
           ALK +F LCD D DGALSD ELNDF  KC      PS+I  +K  ++E+LP G ND GLT
Sbjct: 201 ALKRIFILCDHDKDGALSDAELNDFQVKCFNAPLQPSEIVGVKRVVQEKLPEGVNDHGLT 260

Query: 356 LMGFLSLH 379
           L GFL LH
Sbjct: 261 LTGFLFLH 268


>gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp. melo]
          Length = 647

 Score =  128 bits (322), Expect = 4e-28
 Identities = 68/128 (53%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
 Frame = +2

Query: 11  KEVLVEITKKFPEIESCIECSAANPFEVLEVISCIQRAVLFPQGLLYHPETQKLKPECEK 190
           ++V+  I ++F EIE+CIECSA    ++ EV    Q+AVL P G L+  ETQ LKP C +
Sbjct: 141 EQVMSPIMQQFREIETCIECSAFKHIQIPEVFYYAQKAVLHPTGPLFDQETQTLKPRCVR 200

Query: 191 ALKWVFKLCDRDLDGALSDEELNDFLGKCL-----PSQIEVIKADIKERLPNGFNDCGLT 355
           ALK +F LCD D DGALSD ELNDF  KC      PS+I  +K  ++E+LP G ND GLT
Sbjct: 201 ALKRIFILCDHDKDGALSDAELNDFQVKCFNAPLQPSEIVGVKRVVQEKLPEGVNDRGLT 260

Query: 356 LMGFLSLH 379
           L GFL LH
Sbjct: 261 LTGFLFLH 268


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