BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037610
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    66   3e-09
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 65   4e-09
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...    64   1e-08
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    63   2e-08
gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thali...    62   5e-08

>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/84 (40%), Positives = 51/84 (60%)
 Frame = -2

Query: 254  PVKYLGLPLTATQIGIKDCYPLIEKFTAKISNWKARTLSHVGRLMLIQSGHSRFSSCLLV 75
            PV+YLGLPL   ++ + DC PL+EK  ++IS+WK R LS+ GRL L+ S  S  +    +
Sbjct: 1023 PVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTK-FWI 1081

Query: 74   SDFHYSRYSVMDKIAEVCTKFLWN 3
            S F   R  + + I ++   FLW+
Sbjct: 1082 SAFRLPRACIRE-IEQISAAFLWS 1104


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
 Frame = -2

Query: 260 QPPVKYLGLPLTATQIGIKDCYPLIEKFTAKISNWKARTLSHVGRLMLIQSGHSRFSSCL 81
           Q PV+YLGLPL   Q+   D  PL++K  +KIS+W AR+LS+ GRL LI       S  +
Sbjct: 339 QLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALIN------SVIV 392

Query: 80  LVSDFHYSRYSV----MDKIAEVCTKFLWN 3
            +S+F  S Y +    + +I ++C+ FLW+
Sbjct: 393 SLSNFWMSAYRLPAGCIKEIEKLCSAFLWS 422


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
 Frame = -2

Query: 260  QPPVKYLGLPLTATQIGIKDCYPLIEKFTAKISNWKARTLSHVGRLMLIQSGHSRFSSCL 81
            Q PV+YLG PL   Q+   D  PL++K  +KIS+W AR+LS+ GRL LI       S  +
Sbjct: 908  QLPVRYLGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALIN------SVIV 961

Query: 80   LVSDFHYSRYSV----MDKIAEVCTKFLWN 3
             +S+F  S Y +    + +I ++C+ FLW+
Sbjct: 962  SLSNFWMSAYRLPAGCIKEIEKLCSAFLWS 991


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
 Frame = -2

Query: 260  QPPVKYLGLPLTATQIGIKDCYPLIEKFTAKISNWKARTLSHVGRLMLIQSGHSRFSSCL 81
            Q PV+YLGLPL   Q+   D  PLIE    KIS+W AR+LS+ GRL L+       S  +
Sbjct: 1063 QLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLN------SVIV 1116

Query: 80   LVSDFHYSRYSV----MDKIAEVCTKFLWN 3
             +++F  S Y +    + +I ++C+ FLW+
Sbjct: 1117 SIANFWMSAYRLPAGCIREIEKLCSAFLWS 1146


>gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 355

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
 Frame = -2

Query: 266 TVQPPVKYLGLPLTATQIGIKDCYPLIEKFTAKISNWKARTLSHVGRLMLIQSGHSRFSS 87
           T Q PV+YLGLPL    +   D  PLIEK   +IS+W  R LS+ GRL LI+      S 
Sbjct: 9   TSQLPVRYLGLPLMTKAMTAHDYLPLIEKIRKRISSWTGRFLSYCGRLQLIK------SV 62

Query: 86  CLLVSDFHYSRY----SVMDKIAEVCTKFLWN 3
            + +++F  S +    + M +I  +C+ FLW+
Sbjct: 63  LMSITNFWSSAFRLPGNCMKEIERLCSAFLWS 94