BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037591
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl...   177   1e-42
emb|CBI27426.3| unnamed protein product [Vitis vinifera]              177   1e-42
ref|XP_002514548.1| rubisco subunit binding-protein beta subunit...   175   4e-42
ref|XP_003516734.1| PREDICTED: ruBisCO large subunit-binding pro...   167   8e-40
ref|XP_003520145.1| PREDICTED: ruBisCO large subunit-binding pro...   165   4e-39

>ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis
           vinifera]
          Length = 610

 Score =  177 bits (448), Expect = 1e-42
 Identities = 94/113 (83%), Positives = 101/113 (89%)
 Frame = -1

Query: 339 TDGSTQQAVNKRVAQIRNLVENSDENFQKKILNERIARLSGGIAILQVGTQTEVELKDKQ 160
           TDGSTQ AV KRV+QIR LVEN++ENFQKKILNERIARLSGGIAILQVG QT+VELKDKQ
Sbjct: 360 TDGSTQPAVEKRVSQIRGLVENTEENFQKKILNERIARLSGGIAILQVGAQTQVELKDKQ 419

Query: 159 LRIEDALNATKAAIEEXXXXXXGCSLLRLSLKVDSIKECLENEEQKIGADIFK 1
           LRIEDA+NATKAAIEE      GCSLLRLSLKVD IKE L+NEEQKIGA+IFK
Sbjct: 420 LRIEDAVNATKAAIEEGVVVGGGCSLLRLSLKVDGIKELLDNEEQKIGAEIFK 472


>emb|CBI27426.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  177 bits (448), Expect = 1e-42
 Identities = 94/113 (83%), Positives = 101/113 (89%)
 Frame = -1

Query: 339 TDGSTQQAVNKRVAQIRNLVENSDENFQKKILNERIARLSGGIAILQVGTQTEVELKDKQ 160
           TDGSTQ AV KRV+QIR LVEN++ENFQKKILNERIARLSGGIAILQVG QT+VELKDKQ
Sbjct: 334 TDGSTQPAVEKRVSQIRGLVENTEENFQKKILNERIARLSGGIAILQVGAQTQVELKDKQ 393

Query: 159 LRIEDALNATKAAIEEXXXXXXGCSLLRLSLKVDSIKECLENEEQKIGADIFK 1
           LRIEDA+NATKAAIEE      GCSLLRLSLKVD IKE L+NEEQKIGA+IFK
Sbjct: 394 LRIEDAVNATKAAIEEGVVVGGGCSLLRLSLKVDGIKELLDNEEQKIGAEIFK 446


>ref|XP_002514548.1| rubisco subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis] gi|223546152|gb|EEF47654.1| rubisco
           subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis]
          Length = 592

 Score =  175 bits (443), Expect = 4e-42
 Identities = 93/113 (82%), Positives = 100/113 (88%)
 Frame = -1

Query: 339 TDGSTQQAVNKRVAQIRNLVENSDENFQKKILNERIARLSGGIAILQVGTQTEVELKDKQ 160
           TDGSTQ AV KRV+QIR L EN++ENFQKKILNERIARLSGGIAILQVG QT+VELKDKQ
Sbjct: 369 TDGSTQAAVQKRVSQIRGLAENTEENFQKKILNERIARLSGGIAILQVGAQTQVELKDKQ 428

Query: 159 LRIEDALNATKAAIEEXXXXXXGCSLLRLSLKVDSIKECLENEEQKIGADIFK 1
           LRIEDALNATKAAIEE      GCSLLRLS KVD+IKE L+NEEQKIGA+IFK
Sbjct: 429 LRIEDALNATKAAIEEGVVIGGGCSLLRLSTKVDAIKELLDNEEQKIGAEIFK 481


>ref|XP_003516734.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 575

 Score =  167 bits (423), Expect = 8e-40
 Identities = 89/113 (78%), Positives = 98/113 (86%)
 Frame = -1

Query: 339 TDGSTQQAVNKRVAQIRNLVENSDENFQKKILNERIARLSGGIAILQVGTQTEVELKDKQ 160
           TDGST++AV KRV Q+R LVEN+ ENFQKKILNERIARLSGGIAILQVG QT+VELKDKQ
Sbjct: 334 TDGSTREAVEKRVCQLRRLVENTVENFQKKILNERIARLSGGIAILQVGAQTQVELKDKQ 393

Query: 159 LRIEDALNATKAAIEEXXXXXXGCSLLRLSLKVDSIKECLENEEQKIGADIFK 1
           LRIEDALNATKAAIEE      GC LLRLS KVD IK+ LENEEQ+IGA+IF+
Sbjct: 394 LRIEDALNATKAAIEEGVVVGGGCCLLRLSQKVDGIKKLLENEEQQIGAEIFR 446


>ref|XP_003520145.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 646

 Score =  165 bits (417), Expect = 4e-39
 Identities = 87/113 (76%), Positives = 98/113 (86%)
 Frame = -1

Query: 339 TDGSTQQAVNKRVAQIRNLVENSDENFQKKILNERIARLSGGIAILQVGTQTEVELKDKQ 160
           TDGST++AV KRV Q+R LVEN+ ENFQK ILNERIARLSGGIAILQVG QT+VELKDKQ
Sbjct: 364 TDGSTREAVEKRVHQLRRLVENTVENFQKNILNERIARLSGGIAILQVGAQTQVELKDKQ 423

Query: 159 LRIEDALNATKAAIEEXXXXXXGCSLLRLSLKVDSIKECLENEEQKIGADIFK 1
           LR+EDALNATKAAIEE      GCSLLRLS KVD IK+ L+NEEQ+IGA+IF+
Sbjct: 424 LRVEDALNATKAAIEEGVVVGGGCSLLRLSQKVDGIKKLLDNEEQQIGAEIFR 476