BLASTX nr result

ID: Coptis21_contig00037571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037571
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38766.2| Polyprotein, putative [Solanum demissum]                66   3e-09
emb|CAN66626.1| hypothetical protein VITISV_001861 [Vitis vinifera]    65   6e-09
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]    59   5e-07
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]    55   6e-06
emb|CAN67087.1| hypothetical protein VITISV_031092 [Vitis vinifera]    55   8e-06

>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
          Length = 1355

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/62 (62%), Positives = 43/62 (69%)
 Frame = -3

Query: 187  NWKFVESITQKTSNVVFYSMRDA*ISRKSSKQTCIARSTMESEFITLDKAG*EVE*LQNF 8
            NW    +  + TS  VF   R A +S KSSKQTCIARSTMES+FI LDKAG E E LQNF
Sbjct: 1111 NWITGSNEVKSTSGYVFTLGRGA-VSWKSSKQTCIARSTMESKFIALDKAGKEAEWLQNF 1169

Query: 7    LE 2
            LE
Sbjct: 1170 LE 1171


>emb|CAN66626.1| hypothetical protein VITISV_001861 [Vitis vinifera]
          Length = 422

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/62 (59%), Positives = 44/62 (70%)
 Frame = -3

Query: 187 NWKFVESITQKTSNVVFYSMRDA*ISRKSSKQTCIARSTMESEFITLDKAG*EVE*LQNF 8
           NW      ++ TS  VF ++  A +S KSSKQTCIARSTMESEFI +DKAG E E L+NF
Sbjct: 272 NWISDSKDSKSTSGYVF-TLGGAAVSWKSSKQTCIARSTMESEFIAIDKAGEEAEXLRNF 330

Query: 7   LE 2
           LE
Sbjct: 331 LE 332


>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
          Length = 839

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/51 (62%), Positives = 37/51 (72%)
 Frame = -3

Query: 187 NWKFVESITQKTSNVVFYSMRDA*ISRKSSKQTCIARSTMESEFITLDKAG 35
           NW F    ++ TS  +F ++    ISRKSSKQTCIARSTMESEFI LDKAG
Sbjct: 789 NWIFDMKDSKSTSGYIF-TIGGVAISRKSSKQTCIARSTMESEFIALDKAG 838


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/62 (54%), Positives = 41/62 (66%)
 Frame = -3

Query: 187  NWKFVESITQKTSNVVFYSMRDA*ISRKSSKQTCIARSTMESEFITLDKAG*EVE*LQNF 8
            NW      ++  S  VF ++  A +S KSSKQT IARSTMESEFI LDK G E E L++F
Sbjct: 1165 NWISNVKDSKSHSGYVF-TLGGAAVSWKSSKQTVIARSTMESEFIALDKCGEEAEWLRHF 1223

Query: 7    LE 2
            LE
Sbjct: 1224 LE 1225


>emb|CAN67087.1| hypothetical protein VITISV_031092 [Vitis vinifera]
          Length = 484

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/61 (50%), Positives = 41/61 (67%)
 Frame = -3

Query: 187 NWKFVESITQKTSNVVFYSMRDA*ISRKSSKQTCIARSTMESEFITLDKAG*EVE*LQNF 8
           NW    +  + TS  VF  +  + +S KS+K+TCI RSTME+EFI L+KA  EVE L+NF
Sbjct: 323 NWILDSNEMKSTSGYVFI-LGGSVVSWKSTKKTCITRSTMEAEFIALEKASSEVEWLRNF 381

Query: 7   L 5
           L
Sbjct: 382 L 382


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