BLASTX nr result
ID: Coptis21_contig00037533
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00037533 (291 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABJ96383.1| hypothetical protein [Prunus persica] 99 4e-19 gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 98 6e-19 emb|CAN66359.1| hypothetical protein VITISV_018312 [Vitis vinifera] 90 2e-16 ref|XP_003595977.1| Mitochondrial protein, putative [Medicago tr... 89 3e-16 emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera] 89 3e-16 >gb|ABJ96383.1| hypothetical protein [Prunus persica] Length = 193 Score = 99.0 bits (245), Expect = 4e-19 Identities = 43/72 (59%), Positives = 57/72 (79%) Frame = +2 Query: 2 WCDNLSAMALSQNAVFHARTKHIEVDYHFIREKVTSGALKLQYICTQDQTADILTKGLSS 181 WCDNL A LS N +FHARTKH+E+DYHF+R++V++G L +Q+I T+DQ ADI+TK LSS Sbjct: 117 WCDNLGATYLSANPIFHARTKHVEIDYHFVRDQVSAGKLSVQFISTKDQLADIMTKPLSS 176 Query: 182 TRFNILQQKLGV 217 RF ++ KL V Sbjct: 177 PRFTFIRDKLRV 188 >gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] Length = 1384 Score = 98.2 bits (243), Expect = 6e-19 Identities = 44/76 (57%), Positives = 56/76 (73%) Frame = +2 Query: 2 WCDNLSAMALSQNAVFHARTKHIEVDYHFIREKVTSGALKLQYICTQDQTADILTKGLSS 181 WCDN+S+++L+ N VFH+RTKHIEVDYH++R+KV L + Y+ T DQTADI TKGLS+ Sbjct: 1294 WCDNISSISLASNPVFHSRTKHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKGLST 1353 Query: 182 TRFNILQQKLGVLPGP 229 RF L KL V P Sbjct: 1354 QRFQFLASKLPVRARP 1369 >emb|CAN66359.1| hypothetical protein VITISV_018312 [Vitis vinifera] Length = 542 Score = 89.7 bits (221), Expect = 2e-16 Identities = 41/78 (52%), Positives = 56/78 (71%) Frame = +2 Query: 2 WCDNLSAMALSQNAVFHARTKHIEVDYHFIREKVTSGALKLQYICTQDQTADILTKGLSS 181 WCDN+SA+AL+ N +FHAR+KHIEVDYHF+REKV + L++I T Q ADI TKG ++ Sbjct: 448 WCDNISALALASNXIFHARSKHIEVDYHFVREKVAHRDIILEHISTSIQPADIFTKGHTA 507 Query: 182 TRFNILQQKLGVLPGPSA 235 F L+ KL + P++ Sbjct: 508 DXFCFLRDKLAICDLPTS 525 >ref|XP_003595977.1| Mitochondrial protein, putative [Medicago truncatula] gi|355485025|gb|AES66228.1| Mitochondrial protein, putative [Medicago truncatula] Length = 244 Score = 89.4 bits (220), Expect = 3e-16 Identities = 40/76 (52%), Positives = 54/76 (71%) Frame = +2 Query: 2 WCDNLSAMALSQNAVFHARTKHIEVDYHFIREKVTSGALKLQYICTQDQTADILTKGLSS 181 WCDNLSA AL+ N V HAR+KHIE+D H+IR++V + + Y+ + DQ + LTK L+ Sbjct: 160 WCDNLSAKALASNPVMHARSKHIEIDVHYIRDQVLQDKIIVAYVPSADQITNCLTKALTH 219 Query: 182 TRFNILQQKLGVLPGP 229 TRFN L+ KLG+ P P Sbjct: 220 TRFNQLRDKLGLTPSP 235 >emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera] Length = 1282 Score = 89.4 bits (220), Expect = 3e-16 Identities = 40/76 (52%), Positives = 58/76 (76%) Frame = +2 Query: 2 WCDNLSAMALSQNAVFHARTKHIEVDYHFIREKVTSGALKLQYICTQDQTADILTKGLSS 181 W DN+SA +++N VFHARTKHIE+D HFIR++V G ++L ++ T+DQ AD+LTK L+S Sbjct: 1188 WYDNISAYHMAKNPVFHARTKHIEIDLHFIRDQVIRGKIQLHFVPTEDQPADLLTKHLTS 1247 Query: 182 TRFNILQQKLGVLPGP 229 +RF L+ +L + P P Sbjct: 1248 SRFLSLKSQLCIAPRP 1263