BLASTX nr result

ID: Coptis21_contig00037533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037533
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ96383.1| hypothetical protein [Prunus persica]                   99   4e-19
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               98   6e-19
emb|CAN66359.1| hypothetical protein VITISV_018312 [Vitis vinifera]    90   2e-16
ref|XP_003595977.1| Mitochondrial protein, putative [Medicago tr...    89   3e-16
emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]    89   3e-16

>gb|ABJ96383.1| hypothetical protein [Prunus persica]
          Length = 193

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 43/72 (59%), Positives = 57/72 (79%)
 Frame = +2

Query: 2   WCDNLSAMALSQNAVFHARTKHIEVDYHFIREKVTSGALKLQYICTQDQTADILTKGLSS 181
           WCDNL A  LS N +FHARTKH+E+DYHF+R++V++G L +Q+I T+DQ ADI+TK LSS
Sbjct: 117 WCDNLGATYLSANPIFHARTKHVEIDYHFVRDQVSAGKLSVQFISTKDQLADIMTKPLSS 176

Query: 182 TRFNILQQKLGV 217
            RF  ++ KL V
Sbjct: 177 PRFTFIRDKLRV 188


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 44/76 (57%), Positives = 56/76 (73%)
 Frame = +2

Query: 2    WCDNLSAMALSQNAVFHARTKHIEVDYHFIREKVTSGALKLQYICTQDQTADILTKGLSS 181
            WCDN+S+++L+ N VFH+RTKHIEVDYH++R+KV    L + Y+ T DQTADI TKGLS+
Sbjct: 1294 WCDNISSISLASNPVFHSRTKHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKGLST 1353

Query: 182  TRFNILQQKLGVLPGP 229
             RF  L  KL V   P
Sbjct: 1354 QRFQFLASKLPVRARP 1369


>emb|CAN66359.1| hypothetical protein VITISV_018312 [Vitis vinifera]
          Length = 542

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/78 (52%), Positives = 56/78 (71%)
 Frame = +2

Query: 2   WCDNLSAMALSQNAVFHARTKHIEVDYHFIREKVTSGALKLQYICTQDQTADILTKGLSS 181
           WCDN+SA+AL+ N +FHAR+KHIEVDYHF+REKV    + L++I T  Q ADI TKG ++
Sbjct: 448 WCDNISALALASNXIFHARSKHIEVDYHFVREKVAHRDIILEHISTSIQPADIFTKGHTA 507

Query: 182 TRFNILQQKLGVLPGPSA 235
             F  L+ KL +   P++
Sbjct: 508 DXFCFLRDKLAICDLPTS 525


>ref|XP_003595977.1| Mitochondrial protein, putative [Medicago truncatula]
           gi|355485025|gb|AES66228.1| Mitochondrial protein,
           putative [Medicago truncatula]
          Length = 244

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/76 (52%), Positives = 54/76 (71%)
 Frame = +2

Query: 2   WCDNLSAMALSQNAVFHARTKHIEVDYHFIREKVTSGALKLQYICTQDQTADILTKGLSS 181
           WCDNLSA AL+ N V HAR+KHIE+D H+IR++V    + + Y+ + DQ  + LTK L+ 
Sbjct: 160 WCDNLSAKALASNPVMHARSKHIEIDVHYIRDQVLQDKIIVAYVPSADQITNCLTKALTH 219

Query: 182 TRFNILQQKLGVLPGP 229
           TRFN L+ KLG+ P P
Sbjct: 220 TRFNQLRDKLGLTPSP 235


>emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]
          Length = 1282

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/76 (52%), Positives = 58/76 (76%)
 Frame = +2

Query: 2    WCDNLSAMALSQNAVFHARTKHIEVDYHFIREKVTSGALKLQYICTQDQTADILTKGLSS 181
            W DN+SA  +++N VFHARTKHIE+D HFIR++V  G ++L ++ T+DQ AD+LTK L+S
Sbjct: 1188 WYDNISAYHMAKNPVFHARTKHIEIDLHFIRDQVIRGKIQLHFVPTEDQPADLLTKHLTS 1247

Query: 182  TRFNILQQKLGVLPGP 229
            +RF  L+ +L + P P
Sbjct: 1248 SRFLSLKSQLCIAPRP 1263


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